Parental gene:

SNRNP27, ENSG00000124380

Aliases:None
Description:small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Source:HGNC Symbol;Acc:30240]
Organism:Human (Homo sapiens)
Coordinates:2:70120691..70132707(+)


>ENSG00000124380
ATGGGTCGCAGTCGCAGCCGCTCTCCACGGAGGGAACGTAGGCGTTCCCGGTCCACATCCCGGGAGAGAGAACGCAGGCG
CCGAGAAAGGTCCAGGTCTCGGGAGAGAGATCGGAGAAGGAGCCGCTCGCGATCCCCGCACCGAAGACGCTCCCGATCTC
CAAGACGACATAGATCCACATCTCCTTCCCCTTCTCGACTGAAAGAAAGAAGAGATGAGGAAAAGAAAGAAACAAAAGAA
ACAAAGAGCAAAGAACGGCAGATTACTGAGGAAGACTTAGAGGGCAAAACAGAGGAAGAAATAGAAATGATGAAGTTAAT
GGGATTTGCCTCCTTTGACTCCACAAAAGGTAAGAAGGTGGATGGCTCTGTAAATGCCTATGCCATAAATGTCTCTCAGA
AGAGGAAGTACAGGCAGTACATGAATCGAAAAGGTGGATTCAACAGACCTTTGGATTTCATTGCATGA

Library Parental gene expression (RPM)
bodymap2_adipose 24 .97 RPM
bodymap2_adrenal 22 .54 RPM
bodymap2_brain 33 .36 RPM
bodymap2_breast 27 .51 RPM
bodymap2_colon 29 .51 RPM
bodymap2_heart 23 .08 RPM
bodymap2_kidney 24 .46 RPM
bodymap2_liver 11 .01 RPM
bodymap2_lung 30 .19 RPM
bodymap2_lymph_node 30 .92 RPM
bodymap2_ovary 16 .94 RPM
bodymap2_prostate 29 .55 RPM
bodymap2_skeletal_muscle 32 .90 RPM
bodymap2_testis 24 .19 RPM
bodymap2_thyroid 25 .01 RPM
bodymap2_white_blood_cells 28 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000037746 ortholog_one2one 4 retrogenes
retro_btau_1352, retro_btau_375, retro_btau_514, retro_btau_515,
Choloepus hoffmanni ENSCHOG00000003042 ortholog_one2one 1 retrogene
retro_chof_2589,
Echinops telfairi ENSETEG00000017344 ortholog_one2one 1 retrogene
retro_etel_655,
Mus musculus ENSMUSG00000001158 ortholog_one2one 2 retrogenes
retro_mmus_1977, retro_mmus_2105,
Oryctolagus cuniculus ENSOCUG00000022967 ortholog_one2one 1 retrogene
retro_ocun_1281,
Pongo abelii ENSPPYG00000012332 ortholog_one2one 2 retrogenes
retro_pabe_1990, retro_pabe_2782,
Pan troglodytes ENSPTRG00000012022 ortholog_one2one 1 retrogene
retro_ptro_2300,
Sus scrofa ENSSSCG00000025674 ortholog_one2one 1 retrogene
retro_sscr_285,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3387 81.94 100.00
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Download FASTA sequences of all ENSG00000124380 retrocopies