Parental gene: | CTDSPL2, ENSG00000137770 |
| Aliases: | CTDSPL2, HSPC129 |
| Description: | CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 [Source:HGNC Symbol;Acc:26936] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 15:44719431..44821236(+) |
>ENSG00000137770
ATGAGGCTGAGAACACGGAAAGCTTCTCAGCAGTCAAATCAAATCCAAACACAACGCACTGCCAGAGCAAAGAGGAAATA
TTCAGAGGTTGATGATAGCCTGCCTTCAGGAGGAGAAAAACCATCGAAGAATGAAACCGGCTTGTTGTCTTCAATTAAAA
AATTTATTAAAGGAAGCACACCTAAGGAAGAGAGAGAAAATCCTTCAAAACGGAGTAGAATTGAACGTGATATAGATAAC
AATTTGATCACGTCAACACCAAGAGCAGGAGAAAAACCTAACAAACAGATATCTCGAGTAAGACGGAAAAGTCAAGTAAA
TGGAGAAGCTGGTAGTTATGAAATGACAAATCAACATGTAAAACAAAATGGAAAATTAGAAGATAATCCTTCCTCTGGCA
GTCCTCCAAGGACTACTTTGTTGGGGACCATATTTTCACCTGTCTTCAACTTTTTTTCACCAGCAAATAAAAATGGAACG
TCAGGATCAGATTCTCCAGGACAGGCTGTGGAAGCTGAAGAAATAGTAAAACAACTTGATATGGAACAGGTGGATGAGAT
CACTACCAGTACTACTACATCAACTAATGGAGCAGCTTACTCAAATCAAGCAGTTCAAGTGAGACCATCACTAAACAATG
GTTTAGAAGAAGCAGAAGAAACAGTTAATCGTGATATCCCACCCCTTACAGCACCAGTAACTCCAGATAGTGGTTATTCA
TCAGCCCACGCGGAGGCCACCTATGAAGAAGACTGGGAAGTATTTGACCCCTATTATTTCATCAAACATGTCCCGCCACT
GACAGAAGAACAACTAAATAGGAAACCTGCTCTTCCGTTGAAAACAAGAAGCACACCGGAATTCTCCCTAGTTTTAGACT
TGGATGAAACACTAGTGCATTGTAGTCTAAATGAGCTAGAAGATGCAGCACTTACTTTTCCAGTCCTTTTCCAAGATGTC
ATTTATCAGGTTTATGTGAGATTAAGACCATTTTTCAGGGAATTCCTGGAACGAATGTCTCAGATGTATGAGATCATTCT
TTTTACTGCTTCTAAGAAGGTGTATGCAGACAAGTTACTGAACATACTAGACCCTAAAAAGCAACTGGTCAGGCACCGGC
TTTTCCGTGAACATTGTGTTTGTGTACAAGGAAACTATATAAAGGACTTAAATATTCTTGGAAGAGATCTTTCAAAAACT
ATAATAATTGACAACTCACCACAAGCCTTTGCATATCAGCTTTCTAATGGAATCCCTATAGAAAGTTGGTTTATGGATAA
AAATGACAATGAACTCCTAAAATTGATTCCATTCCTGGAGAAGCTTGTAGAACTGAATGAAGATGTTCGACCACACATCA
GAGACAGATTTCGCTTGCATGATTTGCTGCCCCCAGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 53 .59 RPM |
| bodymap2_adrenal | 63 .07 RPM |
| bodymap2_brain | 44 .21 RPM |
| bodymap2_breast | 43 .74 RPM |
| bodymap2_colon | 31 .90 RPM |
| bodymap2_heart | 20 .81 RPM |
| bodymap2_kidney | 37 .60 RPM |
| bodymap2_liver | 13 .08 RPM |
| bodymap2_lung | 45 .22 RPM |
| bodymap2_lymph_node | 49 .87 RPM |
| bodymap2_ovary | 70 .55 RPM |
| bodymap2_prostate | 51 .96 RPM |
| bodymap2_skeletal_muscle | 26 .70 RPM |
| bodymap2_testis | 59 .50 RPM |
| bodymap2_thyroid | 48 .83 RPM |
| bodymap2_white_blood_cells | 84 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000002423 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000175215 | within_species_paralog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000016742 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_4881 | 83.46 | 54.29 | Please wait, loading  |
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Download FASTA sequences of all ENSG00000137770 retrocopies