Parental gene:

RPL11, ENSG00000142676

Aliases:RPL11, DBA7, GIG34, L11
Description:ribosomal protein L11 [Source:HGNC Symbol;Acc:10301]
Organism:Human (Homo sapiens)
Coordinates:1:24018268..24022915(+)


>ENSG00000142676
ATGGCGCAGGATCAAGGTGAAAAGGAGAACCCCATGCGGGAACTTCGCATCCGCAAACTCTGTCTCAACATCTGTGTTGG
GGAGAGTGGAGACAGACTGACGCGAGCAGCCAAGGTGTTGGAGCAGCTCACAGGGCAGACCCCTGTGTTTTCCAAAGCTA
GATACACTGTCAGATCCTTTGGCATCCGGAGAAATGAAAAGATTGCTGTCCACTGCACAGTTCGAGGGGCCAAGGCAGAA
GAAATCTTGGAGAAGGGTCTAAAGGTGCGGGAGTATGAGTTAAGAAAAAACAACTTCTCAGATACTGGAAACTTTGGTTT
TGGGATCCAGGAACACATCGATCTGGGTATCAAATATGACCCAAGCATTGGTATCTACGGCCTGGACTTCTATGTGGTGC
TGGGTAGGCCAGGTTTCAGCATCGCAGACAAGAAGCGCAGGACAGGCTGCATTGGGGCCAAACACAGAATCAGCAAAGAG
GAGGCCATGCGCTGGTTCCAGCAGAAGTATGATGGGATCATCCTTCCTGGCAAATAA

Library Parental gene expression (RPM)
bodymap2_liver 317 .51 RPM
bodymap2_lung 912 .03 RPM
bodymap2_breast 661 .00 RPM
bodymap2_adipose 970 .38 RPM
bodymap2_adrenal 1130 .92 RPM
bodymap2_skeletal_muscle 396 .86 RPM
bodymap2_thyroid 607 .33 RPM
bodymap2_prostate 1177 .85 RPM
bodymap2_colon 947 .57 RPM
bodymap2_testis 630 .41 RPM
bodymap2_brain 214 .62 RPM
bodymap2_heart 210 .62 RPM
bodymap2_white_blood_cells 1137 .36 RPM
bodymap2_lymph_node 994 .96 RPM
bodymap2_ovary 1227 .26 RPM
bodymap2_kidney 373 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020905 ortholog_one2one 1 retrogene
retro_btau_267,
Canis familiaris ENSCAFG00000013232 ortholog_one2many 2 retrogenes
retro_cfam_1059, retro_cfam_543,
Callithrix jacchus ENSCJAG00000020953 ortholog_one2one 1 retrogene
retro_cjac_790,
Dasypus novemcinctus ENSDNOG00000011230 ortholog_one2one 2 retrogenes
retro_dnov_1453, retro_dnov_605,
Gorilla gorilla ENSGGOG00000014628 possible_ortholog 6 retrogenes
retro_ggor_1192, retro_ggor_1325, retro_ggor_1690, retro_ggor_2204, retro_ggor_533, retro_ggor_603,
Loxodonta africana ENSLAFG00000030853 ortholog_one2one 2 retrogenes
retro_lafr_371, retro_lafr_434,
Macropus eugenii ENSMEUG00000013738 ortholog_one2one 3 retrogenes
retro_meug_488, retro_meug_517, retro_meug_633,
Macaca mulatta ENSMMUG00000002445 possible_ortholog 3 retrogenes
retro_mmul_2039, retro_mmul_2415, retro_mmul_2462,
Monodelphis domestica ENSMODG00000012828 ortholog_one2one 1 retrogene
retro_mdom_641,
Mus musculus ENSMUSG00000059291 ortholog_one2many 3 retrogenes
retro_mmus_144, retro_mmus_146, retro_mmus_78,
Ornithorhynchus anatinus ENSOANG00000000321 ortholog_one2one 1 retrogene
retro_oana_49,
Oryctolagus cuniculus ENSOCUG00000022928 ortholog_one2one 1 retrogene
retro_ocun_1387,
Pongo abelii ENSPPYG00000001736 ortholog_one2one 6 retrogenes
retro_pabe_1478, retro_pabe_1946, retro_pabe_2686, retro_pabe_612, retro_pabe_615, retro_pabe_964,
Pteropus vampyrus ENSPVAG00000004282 ortholog_one2one 1 retrogene
retro_pvam_1068,
Rattus norvegicus ENSRNOG00000026260 ortholog_one2one 9 retrogenes
retro_rnor_1735, retro_rnor_2287, retro_rnor_2314, retro_rnor_2690, retro_rnor_271, retro_rnor_2725, retro_rnor_668, retro_rnor_795, retro_rnor_919,
Sus scrofa ENSSSCG00000024260 ortholog_one2one 4 retrogenes
retro_sscr_1048, retro_sscr_1049, retro_sscr_1074, retro_sscr_819,
Tarsius syrichta ENSTSYG00000001349 ortholog_one2one 6 retrogenes
retro_tsyr_1138, retro_tsyr_127, retro_tsyr_1583, retro_tsyr_1605, retro_tsyr_516, retro_tsyr_520,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_606 74.68 86.52
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2. retro_hsap_712 70.34 80.34
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3. retro_hsap_1159 79.09 61.80
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4. retro_hsap_1801 77.57 61.49
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5. retro_hsap_2272 75.18 77.53
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6. retro_hsap_3238 83.74 69.10
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Download FASTA sequences of all ENSG00000142676 retrocopies