Parental gene:

SPOPL, ENSG00000144228

Aliases:SPOPL, BTBD33
Description:speckle-type POZ protein-like [Source:HGNC Symbol;Acc:27934]
Organism:Human (Homo sapiens)
Coordinates:2:139259370..139331117(+)


>ENSG00000144228
ATGTCTCGGGAACCCACCCCACCTCTACCTGGAGATATGTCTACTGGTCCCATAGCAGAAAGCTGGTGTTACACACAGGT
TAAAGTAGTAAAATTTTCCTATATGTGGACCATTAATAACTTCAGTTTTTGTCGAGAGGAAATGGGTGAAGTGTTAAAAA
GTTCAACATTTTCATCTGGCCCAAGTGACAAAATGAAATGGTGCCTGAGGGTAAACCCAAAGGGATTAGATGATGAAAGT
AAAGACTACTTGTCCTTATATTTGCTTTTAGTCAGCTGCCCCAAAAGTGAAGTTCGAGCAAAATTCAAATTTTCCCTTCT
GAATGCTAAAAGGGAAGAAACAAAAGCAATGGAAAGCCAAAGAGCATATCGATTTGTGCAAGGGAAGGACTGGGGTTTTA
AAAAATTCATTAGAAGGGACTTTTTGCTTGATGAAGCTAATGGTCTTTTACCAGATGACAAGCTTACATTATTTTGTGAG
GTGAGTGTGGTCCAAGATTCAGTAAACATATCAGGACATACTAATACAAATACTTTGAAGGTGCCTGAGTGTCGTCTAGC
AGAAGATTTAGGTAATCTCTGGGAAAACACAAGATTTACAGACTGCAGTTTTTTCGTGAGAGGACAAGAATTTAAAGCTC
ATAAATCTGTGCTTGCAGCTCGATCTCCAGTTTTTAACGCCATGTTTGAACATGAAATGGAAGAAAGCAAAAAGAATCGA
GTGGAAATAAATGATTTAGACCCTGAAGTTTTTAAAGAAATGATGAGATTCATTTACACAGGGAGAGCACCAAACCTTGA
CAAAATGGCTGACAACTTGTTGGCAGCTGCAGACAAATATGCACTGGAACGGCTGAAGGTCATGTGCGAAGAAGCTTTGT
GTAGTAACCTCTCAGTAGAGAATGTTGCAGATACCCTTGTCCTTGCAGATTTGCACAGTGCAGAACAGTTGAAAGCACAA
GCCATAGACTTTATTAATAGGTGCAGTGTACTTCGACAACTTGGGTGTAAAGATGGGAAAAACTGGAACAGCAACCAAGC
AACCGACATAATGGAAACATCAGGGTGGAAGTCCATGATTCAGTCTCACCCTCATTTAGTAGCAGAAGCCTTTCGAGCAC
TAGCATCTGCACAGTGTCCACAGTTTGGCATTCCACGCAAACGGCTAAAACAGTCCTGA

Library Parental gene expression (RPM)
bodymap2_adipose 44 .53 RPM
bodymap2_adrenal 30 .19 RPM
bodymap2_brain 40 .57 RPM
bodymap2_breast 45 .12 RPM
bodymap2_colon 64 .97 RPM
bodymap2_heart 27 .89 RPM
bodymap2_kidney 36 .94 RPM
bodymap2_liver 14 .45 RPM
bodymap2_lung 51 .48 RPM
bodymap2_lymph_node 47 .53 RPM
bodymap2_ovary 42 .76 RPM
bodymap2_prostate 59 .08 RPM
bodymap2_skeletal_muscle 14 .19 RPM
bodymap2_testis 37 .95 RPM
bodymap2_thyroid 35 .74 RPM
bodymap2_white_blood_cells 140 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000014763 ortholog_one2one 1 retrogene
retro_dnov_546,
Gorilla gorilla ENSGGOG00000016285 ortholog_one2one 1 retrogene
retro_ggor_2040,
Macaca mulatta ENSMMUG00000002560 ortholog_one2one 2 retrogenes
retro_mmul_1884, retro_mmul_1885,
Nomascus leucogenys ENSNLEG00000013800 ortholog_one2one 1 retrogene
retro_nleu_1629,
Oryctolagus cuniculus ENSOCUG00000006944 ortholog_one2one 1 retrogene
retro_ocun_1842,
Pongo abelii ENSPPYG00000012825 ortholog_one2one 4 retrogenes
retro_pabe_2438, retro_pabe_2439, retro_pabe_2440, retro_pabe_2599,
Pan troglodytes ENSPTRG00000012504 ortholog_one2one 2 retrogenes
retro_ptro_1991, retro_ptro_2054,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2943 77.98 55.10
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2. retro_hsap_3048 82.38 65.82
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Download FASTA sequences of all ENSG00000144228 retrocopies