Parental gene:

SPOPL, ENSOCUG00000006944

Aliases:None
Description:speckle-type POZ protein-like [Source:HGNC Symbol;Acc:27934]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:7:76396192..76424083(+)


>ENSOCUG00000006944
ATGTCTCGGGAACCTACCCCACCTTTACCTGGAGATATGTCTACTGGTCCTATAGCAGAAAGCTGGTGTTATACACAGGT
TAAAGTAGTAAAATTTTCCTACATGTGGACCATTAATAACTTCAGTTTTTGTCGAGAAGAAATGGGTGAAGTGTTAAAAA
GTTCAACATTTTCATCTGGCCCAAATGACAAAATGAAATGGTGCCTGAGGGTAAACCCAAAGGGATTAGATGATGAAAGT
AAAGACTACTTGTCCTTATATTTGCTTTTAGTCAGCTGCCCCAAAAGTGAAGTTCGAGCAAAATTCAAATTTTCCCTTCT
GAACGCTAAAAGGGAAGAAACAAAAGCAATGGAAAGCCAAAGAGCATACCGATTTGTGCAAGGGAAGGACTGGGGTTTTA
AAAAATTCATTAGAAGGGATTTTTTGCTTGATGAAGCCAATGGTCTTTTACCAGATGACAAGCTTACATTATTTTGTGAG
GTGAGTGTGGTCCAGGACTCAGTAAACATATCAGGACATACTAATACAAATACCTTGAAGGTGCCTGAATGTCGACTAGC
AGAAGATTTAGGTGATCTCTGGGAAAACACAAGATTTACAGATTGCAGTTTTTTTGTGAGAGGACAAGAATTTAAAGCTC
ATAAATCTGTACTTGCAGCCCGATCCCCAGTTTTCAATGCAATGTTTGAACATGAAATGGAAGAAAGCAAAAAGAATCGA
GTAGAAATAAATGATTTAGACCCTGAGGTTTTTAAAGAAATGATGAGATTTGTTTACACGGGAAAAGCACCAAATCTTGA
TAAAATGGCTGACAACTTGTTGGCAGCTGCAGACAAATATGCACTGGAACGACTGAAGGTCATGTGTGAAGAAGCTTTGT
GTAGTAACCTCTCAGTAGAAAATGTTGCTGATACCCTTGTCCTTGCAGATTTGCACAGTGCAGAACAGTTGAAAGCACAA
GCCATAGACTTTATTAATAGGTGCAGTGTACTTCGACAGCTTGGGTGTAAAGATGGGAAAAACTGGAACAGCAATCAAGC
AACTGACATAATGGAAACATCAGGGTGGAAGTCCATGATTCAGTCACACCCTCATTTAGTAGCCGAAGCCTTCCGAGCAC
TGGCGTCTGCACAGTGTCCACAGTTTGGCATTCCTCGCAAACGGCTAAAACAGTCCTGA

Library Parental gene expression (RPM)
SRP017611_brain 34 .60 RPM
SRP017611_kidney 37 .50 RPM
SRP017611_liver 13 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000014763 ortholog_one2one 1 retrogene
retro_dnov_546,
Homo sapiens ENSG00000144228 ortholog_one2one 2 retrogenes
retro_hsap_2943, retro_hsap_3048,
Gorilla gorilla ENSGGOG00000016285 ortholog_one2one 1 retrogene
retro_ggor_2040,
Macaca mulatta ENSMMUG00000002560 ortholog_one2one 2 retrogenes
retro_mmul_1884, retro_mmul_1885,
Nomascus leucogenys ENSNLEG00000013800 ortholog_one2one 1 retrogene
retro_nleu_1629,
Pongo abelii ENSPPYG00000012825 ortholog_one2one 4 retrogenes
retro_pabe_2438, retro_pabe_2439, retro_pabe_2440, retro_pabe_2599,
Pan troglodytes ENSPTRG00000012504 ortholog_one2one 2 retrogenes
retro_ptro_1991, retro_ptro_2054,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1842 80.18 56.63
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Download FASTA sequences of all ENSOCUG00000006944 retrocopies