Parental gene: | RBMS1, ENSG00000153250 |
| Aliases: | RBMS1, C2orf12, HCC-4, MSSP, MSSP-1, MSSP-2, MSSP-3, SCR2, YC1 |
| Description: | RNA binding motif, single stranded interacting protein 1 [Source:HGNC Symbol;Acc:9907] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 2:161128661..161350305(-) |
>ENSG00000153250
ATGGGCAAAGTGTGGAAACAGCAGATGTACCCTCAGTACGCCACCTACTATTACCCCCAGTATCTGCAAGCCAAGCAGTC
TCTGGTCCCAGCCCACCCCATGGCCCCTCCCAGTCCCAGCACCACCAGCAGTAATAACAACAGTAGCAGCAGTAGCAACT
CAGGATGGGATCAGCTCAGCAAAACGAACCTCTATATCCGAGGACTGCCTCCCCACACCACCGACCAGGACCTGGTGAAG
CTCTGTCAACCATATGGGAAAATAGTCTCCACAAAGGCAATTTTGGATAAGACAACGAACAAATGCAAAGGTTATGGTTT
TGTCGACTTTGACAGCCCTGCAGCAGCTCAAAAAGCTGTGTCTGCCCTGAAGGCCAGTGGGGTTCAAGCTCAAATGGCAA
AGCAACAGGAACAAGATCCTACCAACCTCTACATTTCTAATTTGCCACTCTCCATGGATGAGCAAGAACTAGAAAATATG
CTCAAACCATTTGGACAAGTTATTTCTACAAGGATACTACGTGATTCCAGTGGTACAAGTCGTGGTGTTGGCTTTGCTAG
GATGGAATCAACAGAAAAATGTGAAGCTGTTATTGGTCATTTTAATGGAAAATTTATTAAGACACCACCAGGAGTTTCTG
CCCCCACAGAACCTTTATTGTGTAAGTTTGCTGATGGAGGACAGAAAAAGAGACAGAACCCAAACAAATACATCCCTAAT
GGAAGACCATGGCATAGAGAAGGAGAGGTGAGACTTGCTGGAATGACACTTACTTACGACCCAACTACAGCTGCTATACA
GAACGGATTTTATCCTTCACCATACAGTATTGCTACAAACCGAATGATCACTCAAACTTCTATTACACCCTATATTGCAT
CTCCTGTATCTGCCTACCAGGTGCAAAGTCCTTCGTGGATGCAACCTCAACCATATATTCTACAGCACCCTGGTGCCGTG
TTAACTCCCTCAATGGAGCACACCATGTCACTACAGCCCGCATCAATGATCAGCCCTCTGGCCCAGCAGATGAGTCATCT
GTCACTAGGCAGCACCGGAACATACATGCCTGCAACGTCAGCTATGCAAGGAGCCTACTTGCCACAGTATGCACATATGC
AGACGACAGCGGTTCCTGTTGAGGAGGCAAGTGGTCAACAGCAGGTGGCTGTCGAGACGTCTAATGACCATTCTCCATAT
ACCTTTCAACCTAATAAGTAA
ATGGGCAAAGTGTGGAAACAGCAGATGTACCCTCAGTACGCCACCTACTATTACCCCCAGTATCTGCAAGCCAAGCAGTC
TCTGGTCCCAGCCCACCCCATGGCCCCTCCCAGTCCCAGCACCACCAGCAGTAATAACAACAGTAGCAGCAGTAGCAACT
CAGGATGGGATCAGCTCAGCAAAACGAACCTCTATATCCGAGGACTGCCTCCCCACACCACCGACCAGGACCTGGTGAAG
CTCTGTCAACCATATGGGAAAATAGTCTCCACAAAGGCAATTTTGGATAAGACAACGAACAAATGCAAAGGTTATGGTTT
TGTCGACTTTGACAGCCCTGCAGCAGCTCAAAAAGCTGTGTCTGCCCTGAAGGCCAGTGGGGTTCAAGCTCAAATGGCAA
AGCAACAGGAACAAGATCCTACCAACCTCTACATTTCTAATTTGCCACTCTCCATGGATGAGCAAGAACTAGAAAATATG
CTCAAACCATTTGGACAAGTTATTTCTACAAGGATACTACGTGATTCCAGTGGTACAAGTCGTGGTGTTGGCTTTGCTAG
GATGGAATCAACAGAAAAATGTGAAGCTGTTATTGGTCATTTTAATGGAAAATTTATTAAGACACCACCAGGAGTTTCTG
CCCCCACAGAACCTTTATTGTGTAAGTTTGCTGATGGAGGACAGAAAAAGAGACAGAACCCAAACAAATACATCCCTAAT
GGAAGACCATGGCATAGAGAAGGAGAGGTGAGACTTGCTGGAATGACACTTACTTACGACCCAACTACAGCTGCTATACA
GAACGGATTTTATCCTTCACCATACAGTATTGCTACAAACCGAATGATCACTCAAACTTCTATTACACCCTATATTGCAT
CTCCTGTATCTGCCTACCAGGTGCAAAGTCCTTCGTGGATGCAACCTCAACCATATATTCTACAGCACCCTGGTGCCGTG
TTAACTCCCTCAATGGAGCACACCATGTCACTACAGCCCGCATCAATGATCAGCCCTCTGGCCCAGCAGATGAGTCATCT
GTCACTAGGCAGCACCGGAACATACATGCCTGCAACGTCAGCTATGCAAGGAGCCTACTTGCCACAGTATGCACATATGC
AGACGACAGCGGTTCCTGTTGAGGAGGCAAGTGGTCAACAGCAGGTGGCTGTCGAGACGTCTAATGACCATTCTCCATAT
ACCTTTCAACCTAATAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 18 .14 RPM |
| bodymap2_lung | 202 .53 RPM |
| bodymap2_breast | 135 .84 RPM |
| bodymap2_adipose | 158 .49 RPM |
| bodymap2_adrenal | 142 .63 RPM |
| bodymap2_skeletal_muscle | 26 .37 RPM |
| bodymap2_thyroid | 67 .59 RPM |
| bodymap2_prostate | 111 .78 RPM |
| bodymap2_colon | 126 .40 RPM |
| bodymap2_testis | 81 .50 RPM |
| bodymap2_brain | 20 .16 RPM |
| bodymap2_heart | 85 .09 RPM |
| bodymap2_white_blood_cells | 153 .45 RPM |
| bodymap2_lymph_node | 108 .84 RPM |
| bodymap2_ovary | 135 .59 RPM |
| bodymap2_kidney | 102 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000014861 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000070756 | other_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000076067 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000090621 | other_paralog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1131 | 96.60 | 94.09 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000153250 retrocopies