Parental gene:

SPPL3, ENSG00000157837

Aliases:SPPL3, IMP2, MDHV1887, PRO4332, PSH1, PSL4
Description:signal peptide peptidase like 3 [Source:HGNC Symbol;Acc:30424]
Organism:Human (Homo sapiens)
Coordinates:12:121200312..121342174(-)


>ENSG00000157837
ATGGCGGAGCAGACCTACTCGTGGGCCTATTCCCTGGTGGATTCCAGTCAAGTGTCTACATTTCTGATTTCCATTCTTCT
TATAGTCTATGGTAGTTTCAGGTCCCTTAATATGGACTTTGAAAATCAAGATAAGGAGAAAGACAGTAATAGTTCTTCTG
GGTCTTTCAATGGCAACAGCACCAATAATAGCATCCAAACAATTGACTCTACCCAGGCTCTGTTCCTTCCAATTGGAGCA
TCTGTCTCTCTTTTAGTAATGTTCTTCTTCTTTGACTCAGTTCAAGTAGTTTTTACAATATGTACAGCAGTTCTTGCAAC
GATAGCTTTTGCTTTTCTTCTCCTCCCGATGTGCCAGTATTTAACAAGACCCTGCTCACCTCAGAACAAGATTTCCTTTG
GTTGCTGTGGACGTTTCACTGCTGCTGAGTTGCTGTCATTCTCTCTGTCTGTCATGCTCGTCCTCATCTGGGTTCTCACT
GGCCATTGGCTTCTCATGGATGCACTGGCCATGGGCCTCTGTGTCGCCATGATCGCCTTTGTCCGCCTGCCGAGCCTCAA
GGTCTCCTGCCTGCTTCTCTCAGGGCTTCTCATCTATGATGTCTTTTGGGTATTTTTCTCAGCCTACATCTTCAATAGCA
ACGTCATGGTGAAGGTGGCCACTCAGCCGGCTGACAATCCCCTTGACGTTCTATCCCGGAAGCTCCACCTGGGGCCCAAT
GTTGGGCGTGATGTTCCTCGCCTGTCTCTGCCTGGAAAACTGGTCTTCCCAAGCTCCACTGGCAGCCACTTCTCCATGTT
GGGCATCGGAGACATCGTTATGCCTGGTCTCCTACTATGCTTTGTCCTTCGCTATGACAACTACAAAAAGCAAGCCAGTG
GGGACTCCTGTGGGGCCCCTGGACCTGCCAACATCTCCGGGCGCATGCAGAAGGTCTCCTACTTTCACTGCACCCTCATC
GGATACTTTGTAGGCCTGCTCACTGCTACTGTGGCGTCTCGCATTCACCGGGCCGCCCAGCCCGCCCTTCTCTATTTGGT
GCCATTTACTTTATTGCCACTCCTCACGATGGCCTATTTAAAGGGCGACCTCCGGCGGATGTGGTCTGAGCCTTTCCACT
CCAAGTCCAGCAGCTCCCGATTCCTGGAAGTATGA

Library Parental gene expression (RPM)
bodymap2_adipose 44 .07 RPM
bodymap2_adrenal 49 .58 RPM
bodymap2_brain 40 .55 RPM
bodymap2_breast 44 .98 RPM
bodymap2_colon 31 .27 RPM
bodymap2_heart 24 .18 RPM
bodymap2_kidney 43 .62 RPM
bodymap2_liver 16 .14 RPM
bodymap2_lung 29 .48 RPM
bodymap2_lymph_node 45 .21 RPM
bodymap2_ovary 75 .45 RPM
bodymap2_prostate 58 .78 RPM
bodymap2_skeletal_muscle 22 .92 RPM
bodymap2_testis 82 .41 RPM
bodymap2_thyroid 65 .44 RPM
bodymap2_white_blood_cells 59 .22 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000016589 ortholog_one2one 1 retrogene
retro_dnov_175,
Homo sapiens ENSG00000138600 within_species_paralog 1 retrogene
retro_hsap_1566,
Gorilla gorilla ENSGGOG00000016245 ortholog_one2one 1 retrogene
retro_ggor_1392,
Myotis lucifugus ENSMLUG00000012754 ortholog_one2one 1 retrogene
retro_mluc_672,
Macaca mulatta ENSMMUG00000020650 ortholog_one2one 1 retrogene
retro_mmul_1359,
Pongo abelii ENSPPYG00000005041 ortholog_one2one 2 retrogenes
retro_pabe_1578, retro_pabe_1579,
Pan troglodytes ENSPTRG00000005548 ortholog_one2one 1 retrogene
retro_ptro_1275,
Rattus norvegicus ENSRNOG00000001178 ortholog_one2one 1 retrogene
retro_rnor_2157,
Sarcophilus harrisii ENSSHAG00000015326 ortholog_one2one 1 retrogene
retro_shar_660,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1898 78.26 89.06
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Download FASTA sequences of all ENSG00000157837 retrocopies