Parental gene:

SPPL3, ENSGGOG00000016245

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:12:120624933..120673315(-)


>ENSGGOG00000016245
TCCCTTAATATGGACTTTGAAAATCAAGATAAGGAGAAAGACAGTAATAGTTCTTCTGGGTCTTTCAATGGCAACAGCAC
CAATAATAGTATCCAAACAATTGACTCTACCCAGGCTCTGTTCCTTCCAATTGGAGCATCTGTCTCTCTTTTAGTAATGT
TCTTCTTCTTTGACTCAGTTCAAGTAGTTTTTACAATATGTACAGCAGTTCTTGCAACAATAGCTTTTGCTTTTCTTCTC
CTCCCGATGTGCCAGTATTTAACAAGACCCTGCTCACCTCAGAACAAGATTTCCTTTGGTTGCTGTGGACGTTTCACTGC
TGCTGAGTTGCTGTCATTCTCTCTGTCTGTCATGCTCGTCCTCATCTGGGTTCTCACTGGCCATTGGCTTCTCATGGATG
CACTGGCCATGGGCCTCTGTGTCGCCATGATCGCCTTTGTCCGCCTGCCGAGCCTCAAGGTCTCCTGCCTGCTTCTCTCA
GGGCTTCTCATCTATGATGTCTTTTGGGTATTTTTCTCAGCCTACATCTTCAATAGCAACGTCATGGTGAAGGTGGCCAC
TCAGCCGGCTGACAATCCCCTTGACGTTCTATCCCGGAAGCTCCACCTGGGGCCCAATGTTGGGCGTGATGTTCCTCGCC
TGTCTCTGCCTGGAAAACTGGTCTTCCCAAGCTCCACTGGCAGCCACTTCTCCATGTTGGGCATCGGAGACATCGTTATG
CCTGGTCTCCTACTATGCTTTGTCCTTCGCTATGACAACTACAAAAAACAAGCCAGTGGGGACTCCTGTGGGGCCCCTGG
ACCTGCCAACATCTCCGGGCGCATGCAGAAGGTCTCCTACTTTCACTGCACCCTCATCGGATACTTTGTAGGCCTGCTCA
CTGCTACTGTGGCGTCTCGCATTCACCGGGCCGCCCAGCCCGCCCTTCTCTATTTGGTGCCATTTACTTTATTGCCACTC
CTCACGATGGCCTATTTAAAGGGCGACCTCCGGCGGATGTGGTCTGAGCCTTTCCACTCCAAGTCCAGCAGCTCCCGATT
CCTGGAAGTATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 29 .64 RPM
SRP007412_cerebellum 29 .98 RPM
SRP007412_heart 6 .38 RPM
SRP007412_kidney 29 .81 RPM
SRP007412_liver 17 .25 RPM
SRP007412_testis 46 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000016589 ortholog_one2one 1 retrogene
retro_dnov_175,
Homo sapiens ENSG00000157837 ortholog_one2one 1 retrogene
retro_hsap_1898,
Gorilla gorilla ENSGGOG00000013154 within_species_paralog 1 retrogene
retro_ggor_1191,
Myotis lucifugus ENSMLUG00000012754 ortholog_one2one 1 retrogene
retro_mluc_672,
Macaca mulatta ENSMMUG00000020650 ortholog_one2one 1 retrogene
retro_mmul_1359,
Pongo abelii ENSPPYG00000005041 ortholog_one2one 2 retrogenes
retro_pabe_1578, retro_pabe_1579,
Pan troglodytes ENSPTRG00000005548 ortholog_one2one 1 retrogene
retro_ptro_1275,
Rattus norvegicus ENSRNOG00000001178 ortholog_one2one 1 retrogene
retro_rnor_2157,
Sarcophilus harrisii ENSSHAG00000015326 ortholog_one2one 1 retrogene
retro_shar_660,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1392 77.78 96.86
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Download FASTA sequences of all ENSGGOG00000016245 retrocopies