Parental gene:

TKT, ENSG00000163931

Aliases:TKT, HEL107, TK, TKT1
Description:transketolase [Source:HGNC Symbol;Acc:11834]
Organism:Human (Homo sapiens)
Coordinates:3:53258722..53290068(-)


>ENSG00000163931
ATGGAGAGCTACCACAAGCCTGACCAGCAGAAGCTGCAGGCCTTGAAGGACACGGCCAACCGCCTACGTATCAGCTCCAT
CCAGGCCACCACTGCGGCGGGCTCTGGCCACCCCACGTCATGCTGCAGCGCCGCAGAGATCATGGCTGTCCTCTTTTTCC
ACACCATGCGCTACAAGTCCCAGGACCCCCGGAATCCGCACAATGACCGCTTTGTGCTCTCCAAGGGCCATGCAGCTCCC
ATCCTCTACGCGGTCTGGGCTGAAGCTGGTTTCCTGGCCGAGGCGGAGCTGCTGAACCTGAGGAAGATCAGCTCCGACTT
GGACGGGCACCCGGTCCCGAAACAAGCTTTCACCGACGTGGCCACTGGCTCCCTGGGCCAGGGCCTCGGGGCCGCTTGTG
GGATGGCCTACACCGGCAAATACTTCGACAAGGCCAGCCTCCCGAGTAGCTGGGACTACAGCTACCGAGTCTATTGCTTG
CTGGGAGACGGGGAGCTGTCAGAGGGCTCTGTATGGGAGGCCATGGCCTTCGCCAGCATCTATAAGCTGGACAACCTTGT
GGCCATTCTAGACATCAATCGCCTGGGCCAGAGTGACCCGGCCCCACTGCAGCACCAGATGGACATCTACCAGAAGCGGT
GCGAGGCCTTCGGTTGGCATGCCATCATCGTGGATGGACACAGCGTGGAGGAGCTGTGCAAGGCCTTTGGCCAGGCCAAG
CACCAGCCAACAGCCATCATTGCCAAGACCTTCAAGGGCCGAGGGATCACGGGGGTAGAAGATAAGGAGTCTTGGCATGG
GAAGCCCCTCCCCAAAAACATGGCTGAGCAGATCATCCAGGAGATCTACAGCCAGATCCAGAGCAAAAAGAAGATCCTGG
CAACCCCTCCACAGGAGGACGCACCCTCAGTGGACATTGCCAACATCCGCATGCCCAGCCTGCCCAGCTACAAAGTTGGG
GACAAGATAGCCACCCGCAAGGCCTACGGGCAGGCACTGGCCAAGCTGGGCCATGCCAGTGACCGCATCATCGCCCTGGA
TGGGGACACCAAAAATTCCACCTTCTCGGAGATCTTCAAAAAGGAGCACCCGGACCGCTTCATCGAGTGCTACATTGCTG
AGCAGAACATGGTGAGCATCGCGGTGGGCTGTGCCACCCGCAACAGGACGGTGCCCTTCTGCAGCACTTTTGCAGCCTTC
TTCACGCGGGCCTTTGACCAGATTCGCATGGCCGCCATCTCCGAGAGCAACATCAACCTCTGCGGCTCCCACTGCGGCGT
TTCCATCGGGGAAGACGGGCCCTCCCAGATGGCCCTAGAAGATCTGGCTATGTTTCGGTCAGTCCCCACATCAACTGTCT
TTTACCCAAGTGATGGCGTTGCTACAGAGAAGGCAGTGGAACTAGCCGCCAATACAAAGGGTATCTGCTTCATCCGGACC
AGCCGCCCAGAAAATGCCATCATCTATAACAACAATGAGGACTTCCAGGTCGGACAAGCCAAGGTGGTCCTGAAGAGCAA
GGATGACCAGGTGACCGTTATCGGGGCTGGGGTGACCCTGCACGAGGCCTTGGCCGCTGCCGAACTGCTGAAGAAAGAAA
AGATCAACATCCGCGTGCTGGACCCCTTCACCATCAAGCCCCTGGACAGAAAACTCATTCTCGACAGCGCTCGTGCCACC
AAGGGCAGGATCCTCACCGTGGAGGACCATTATTATGAAGGTGGCATTGGTGAGGCTGTGTCCAGTGCAGTAGTGGGCGA
GCCTGGCATCACTGTCACCCACCTGGCAGTTAACCGGGTACCAAGAAGTGGGAAGCCGGCTGAGCTGCTGAAGATGTTTG
GTATCGACAGGGATGCCATTGCACAAGCTGTGAGGGGCCTCATCACCAAGGCCTAG

Library Parental gene expression (RPM)
bodymap2_adipose 212 .24 RPM
bodymap2_adrenal 78 .97 RPM
bodymap2_brain 61 .27 RPM
bodymap2_breast 294 .15 RPM
bodymap2_colon 138 .31 RPM
bodymap2_heart 11 .46 RPM
bodymap2_kidney 158 .66 RPM
bodymap2_liver 63 .46 RPM
bodymap2_lung 184 .74 RPM
bodymap2_lymph_node 98 .02 RPM
bodymap2_ovary 135 .17 RPM
bodymap2_prostate 211 .60 RPM
bodymap2_skeletal_muscle 14 .24 RPM
bodymap2_testis 61 .57 RPM
bodymap2_thyroid 204 .87 RPM
bodymap2_white_blood_cells 440 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000003758 ortholog_one2one 1 retrogene
retro_btau_176,
Callithrix jacchus ENSCJAG00000007253 ortholog_one2one 1 retrogene
retro_cjac_2128,
Cavia porcellus ENSCPOG00000000072 ortholog_one2one 1 retrogene
retro_cpor_45,
Dipodomys ordii ENSDORG00000001392 ortholog_one2one 1 retrogene
retro_dord_329,
Macropus eugenii ENSMEUG00000005312 ortholog_one2one 3 retrogenes
retro_meug_1397, retro_meug_160, retro_meug_796,
Myotis lucifugus ENSMLUG00000000943 ortholog_one2one 1 retrogene
retro_mluc_67,
Macaca mulatta ENSMMUG00000014433 ortholog_one2one 1 retrogene
retro_mmul_74,
Mus musculus ENSMUSG00000021957 ortholog_one2one 1 retrogene
retro_mmus_220,
Oryctolagus cuniculus ENSOCUG00000015904 ortholog_one2one 2 retrogenes
retro_ocun_319, retro_ocun_62,
Otolemur garnettii ENSOGAG00000016911 ortholog_one2one 1 retrogene
retro_ogar_5,
Ochotona princeps ENSOPRG00000009891 ortholog_one2one 1 retrogene
retro_opri_10,
Pan troglodytes ENSPTRG00000015024 ortholog_one2one 1 retrogene
retro_ptro_126,
Pteropus vampyrus ENSPVAG00000016283 ortholog_one2one 1 retrogene
retro_pvam_352,
Rattus norvegicus ENSRNOG00000016064 ortholog_one2many 1 retrogene
retro_rnor_146,
Sarcophilus harrisii ENSSHAG00000017349 ortholog_one2one 1 retrogene
retro_shar_827,
Sus scrofa ENSSSCG00000021408 ortholog_one2one 1 retrogene
retro_sscr_996,
Tupaia belangeri ENSTBEG00000012114 ortholog_one2one 1 retrogene
retro_tbel_3510,
Takifugu rubripes ENSTRUG00000003009 ortholog_one2many 1 retrogene
retro_trub_23,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_47 67.59 98.07
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Download FASTA sequences of all ENSG00000163931 retrocopies