Parental gene: | CHMP4A, ENSG00000254505 |
| Aliases: | CHMP4A, C14orf123, CHMP4, CHMP4B, HSPC134, SHAX2, SNF7, SNF7-1, VPS32-1, VPS32A |
| Description: | charged multivesicular body protein 4A [Source:HGNC Symbol;Acc:20274] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 14:24678788..24683075(-) |
>ENSG00000254505
ATGTCGCGGCGGCGCCCTGAGGACGGATTGGGCAAGGCTGGTCCCTGTGTGATGAGACATCACCCTCCCAGGAGCAAGGC
GGAAGTCTGGAGGACGCTGAGGGGCGGAGGCGGGAGAGGCGAGCTCGCGATGAGTGGTCTCGGCAGGCTCTTCGGGAAGG
GGAAGAAGGAGAAAGGGCCAACCCCTGAAGAAGCAATACAGAAACTGAAGGAGACAGAGAAGATACTGATCAAGAAACAG
GAATTTTTGGAGCAGAAGATTCAACAGGAGCTACAAACAGCCAAGAAGTATGGGACCAAGAATAAGAGAGCTGCCCTACA
GGCTTTGCGGAGGAAGAAAAGATTCGAACAGCAGCTGGCACAAACTGACGGGACATTATCCACCCTGGAGTTTCAGCGTG
AGGCCATTGAGAATGCCACTACCAATGCAGAAGTCCTTCGTACCATGGAGCTTGCTGCCCAAAGCATGAAGAAGGCCTAC
CAGGACATGGACATTGACAAGGTAGATGAACTGATGACTGACATCACGGAACAACAGGAGGTGGCCCAGCAGATCTCAGA
TGCCATTTCTCGGCCTATGGGCTTTGGAGATGATGTGGATGAGGATGAACTGCTGGAGGAGCTAGAGGAGCTGGAGCAGG
AGGAATTGGCCCAGGAGTTGTTAAATGTGGGCGACAAGGAAGAAGAACCCTCAGTCAAATTGCCTAGTGTACCTTCTACT
CATCTGCCGGCAGGGCCAGCTCCCAAAGTGGATGAAGATGAAGAAGCACTAAAGCAGTTGGCTGAGTGGGTATCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 1 .01 RPM |
| bodymap2_adrenal | 5 .85 RPM |
| bodymap2_brain | 1 .55 RPM |
| bodymap2_breast | 2 .12 RPM |
| bodymap2_colon | 1 .78 RPM |
| bodymap2_heart | 0 .41 RPM |
| bodymap2_kidney | 1 .65 RPM |
| bodymap2_liver | 0 .57 RPM |
| bodymap2_lung | 1 .53 RPM |
| bodymap2_lymph_node | 4 .28 RPM |
| bodymap2_ovary | 2 .31 RPM |
| bodymap2_prostate | 0 .87 RPM |
| bodymap2_skeletal_muscle | 0 .36 RPM |
| bodymap2_testis | 1 .32 RPM |
| bodymap2_thyroid | 2 .79 RPM |
| bodymap2_white_blood_cells | 1 .32 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000101421 | within_species_paralog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000016091 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000001732 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000012476 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000005691 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000008328 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2284 | 59.13 | 76.60 | Please wait, loading  |
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Download FASTA sequences of all ENSG00000254505 retrocopies