Parental gene:

MDP1, ENSMMUG00000012476

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:7:87103488..87110067(-)


>ENSMMUG00000012476
TTCACAAAATTTGGGCCTACTCCACTGGACTCCTCAGGTAAGAAGGAGAAAGGGCCAACCCCTGAAGAAGCAATACAGAA
ACTGAAGGAGACAGAGAAGATACTGATCAAGAAACAGGAATTTTTGGAGCAGAAGATTCAACAGGAGCTACAAACAGCCA
AGAAGTATGGGACCAAGAATAAGAGAGCTGCCCTACAGGCTTTGCGGAGGAAGAAAAGATTCGAACAGCAGCTGGCACAA
ACTGACGGGACTTTATCCACCCTGGAGTTTCAGCGTGAGGCCATTGAGAATGCCACCACCAATGCAGAAGTCCTTCGTAC
CATGGAGCTTGCTGCCCAAGGCATGAAGAAAGCCTACCAGGACATGGACATTGACAAGGTAGATGAACTGATGACTGACA
TCACAGAACAACAGGAGGTGGCCCAGCAGATCTCAGATGCCATTTCTCGGCCTATGGGCTTTGGAGATGATGTGGATGAG
GATGAACTGCTGGAGGAGCTAGAGTTGCTGGAACAGGAGGAATTGGCCCAGGAGTTGTTAAGTGTGGGCGACAAGGAGGA
AGAACCCCCAGTCAAATTGCCTAGTGTACCTTCTACTCATCTGCCGGCAGAGCCAGGCAAGCAGAAGGACCACATCTTTA
GTTTTTTTGTGGGGAGAGAGAATTCAGCAGGCTCTGAA

Library Parental gene expression (RPM)
SRP007412_brain 12 .55 RPM
SRP007412_brain_prefrontal_cortex 23 .09 RPM
SRP007412_cerebellum 21 .96 RPM
SRP007412_heart 17 .43 RPM
SRP007412_kidney 19 .95 RPM
SRP007412_liver 10 .29 RPM
SRP007412_testis 14 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000254505 ortholog_one2one 1 retrogene
retro_hsap_2284,
Gorilla gorilla ENSGGOG00000016091 ortholog_one2one 1 retrogene
retro_ggor_1697,
Microcebus murinus ENSMICG00000001732 ortholog_one2one 1 retrogene
retro_mmur_1101,
Macaca mulatta ENSMMUG00000008084 within_species_paralog 1 retrogene
retro_mmul_2178,
Pongo abelii ENSPPYG00000005691 ortholog_one2one 1 retrogene
retro_pabe_1937,
Sorex araneus ENSSARG00000008328 ortholog_one2one 1 retrogene
retro_sara_530,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1035 56.91 79.28
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2. retro_mmul_1694 98.65 100.00
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Download FASTA sequences of all ENSMMUG00000012476 retrocopies