Parental gene:

IDI1, ENSGGOG00000000934

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:10:1054141..1058269(-)


>ENSGGOG00000000934
ATGCCTGAAATAAACACTAACCACCTCGACAAGCAACAGGTTCAACTCCTGGCAGAGATGTGTATCCTTATTGATGAAAA
TGACAATAAAATTGGAGCTGAGACCAAGAAGAATTGTCACCTGAACGAGAACATTGAGAAAGGATTATTGCATCGAGCTT
TTAGTGTCTTCTTATTCAACACCGAAAATAAGCTTCTGCTACAGCAAAGATCAGATGCTAAGATTACCTTTCCAGGTTGT
TTTACTAACACGTGTTGTAGTCATCCATTAAGTAATCCAGCCGAGCTTGAGGAAAGTGACGCCCTTGGAGTGAGGCGAGC
AGCACAGAGACGGCTGAAAGCTGAGCTAGGAATTCCCTTGGAAGAGGTTCCTCCAGAAGAAATTAATTATTTAACACGAA
TTCACTACAAAGCTCAGTCTGATGGTATCTGGGGTGAACATGAAATTGATTACATTTTGTTGGTGAGGAAGAATGTAACT
TTGAATCCAGATCCCAATGAGATTAAAAGCTATTGTTATGTGTCAAAGGAAGAACTAAAAGAACTTCTGAAAAAAGCAGC
CAGTGGTGAAATTAAGATAACGCCATGGTTTAAAATTATTGCAGCGACTTTTCTCTTTAAATGGTGGGATAACTTAAATC
ATTTGAATCAGTTTGTTGACCATGAGAAAATATACAGAATGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 45 .94 RPM
SRP007412_cerebellum 30 .73 RPM
SRP007412_heart 3 .63 RPM
SRP007412_kidney 20 .77 RPM
SRP007412_liver 31 .15 RPM
SRP007412_testis 79 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000008483 ortholog_one2one 3 retrogenes
retro_cjac_2083, retro_cjac_2591, retro_cjac_2820,
Erinaceus europaeus ENSEEUG00000012555 ortholog_one2one 3 retrogenes
retro_eeur_188, retro_eeur_198, retro_eeur_61,
Homo sapiens ENSG00000067064 ortholog_one2one 3 retrogenes
retro_hsap_2161, retro_hsap_2444, retro_hsap_4053,
Macaca mulatta ENSMMUG00000017115 ortholog_one2one 3 retrogenes
retro_mmul_2340, retro_mmul_632, retro_mmul_899,
Monodelphis domestica ENSMODG00000005998 ortholog_one2one 5 retrogenes
retro_mdom_1107, retro_mdom_1692, retro_mdom_1697, retro_mdom_1724, retro_mdom_547,
Mus musculus ENSMUSG00000058258 ortholog_one2one 4 retrogenes
retro_mmus_2032, retro_mmus_2660, retro_mmus_417, retro_mmus_552,
Nomascus leucogenys ENSNLEG00000013594 ortholog_one2one 3 retrogenes
retro_nleu_1810, retro_nleu_2777, retro_nleu_2804,
Oryctolagus cuniculus ENSOCUG00000007493 ortholog_one2many 1 retrogene
retro_ocun_267,
Ochotona princeps ENSOPRG00000008692 ortholog_one2one 2 retrogenes
retro_opri_694, retro_opri_755,
Pongo abelii ENSPPYG00000002039 ortholog_one2one 2 retrogenes
retro_pabe_1783, retro_pabe_3327,
Pan troglodytes ENSPTRG00000002239 ortholog_one2one 3 retrogenes
retro_ptro_1412, retro_ptro_1647, retro_ptro_2747,
Ictidomys tridecemlineatus ENSSTOG00000023260 ortholog_one2many 1 retrogene
retro_itri_118,
Tursiops truncatus ENSTTRG00000011174 ortholog_one2one 1 retrogene
retro_ttru_255,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1521 69.81 92.07
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2. retro_ggor_1717 88.17 81.50
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3. retro_ggor_2722 72.05 100.00
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Download FASTA sequences of all ENSGGOG00000000934 retrocopies