Parental gene: | MYL12B, ENSGGOG00000004051 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 18:3275441..3291630(+) |
>ENSGGOG00000004051
ATGTCGAGCAAAAAGGCAAAGACCAAGACCACCAAGAAGCGCCCTCAGCGCGCAACATCCAATGTGTTTGCCATGTTTGA
CCAGTCACAGATTCAGGAGTTCAAAGAGGCCTTCAACATGATTGATCAGAACAGAGATGGCTTCATCGACAAGGAAGATT
TGCATGATATGCTTGCTTCTCTAGGGAAGAATCCCACTGATGCATACCTTGATGCCATGATGAATGAGGCCCCAGGGCCC
ATCAATTTCACCATGTTCCTGACCATGTTTGGTGAGAAGTTAAATGGCACAGATCCCGAAGATGTCATCAGAAACGCCTT
TGCTTGCTTTGATGAAGAAGCAACAGGCACCATTCAGGAAGATTACTTGAGAGAGCTGCTGACAACCATGGGGGATCGGT
TTACGGATGAGGAAGTGGATGAGCTGTACAGAGAAGCACCTATTGACAAAAAGGGGAATTTCAATTACATCGAGTTCACA
CGCATCCTGAAACATGGAGCCAAAGACAAAGATGACTGA
ATGTCGAGCAAAAAGGCAAAGACCAAGACCACCAAGAAGCGCCCTCAGCGCGCAACATCCAATGTGTTTGCCATGTTTGA
CCAGTCACAGATTCAGGAGTTCAAAGAGGCCTTCAACATGATTGATCAGAACAGAGATGGCTTCATCGACAAGGAAGATT
TGCATGATATGCTTGCTTCTCTAGGGAAGAATCCCACTGATGCATACCTTGATGCCATGATGAATGAGGCCCCAGGGCCC
ATCAATTTCACCATGTTCCTGACCATGTTTGGTGAGAAGTTAAATGGCACAGATCCCGAAGATGTCATCAGAAACGCCTT
TGCTTGCTTTGATGAAGAAGCAACAGGCACCATTCAGGAAGATTACTTGAGAGAGCTGCTGACAACCATGGGGGATCGGT
TTACGGATGAGGAAGTGGATGAGCTGTACAGAGAAGCACCTATTGACAAAAAGGGGAATTTCAATTACATCGAGTTCACA
CGCATCCTGAAACATGGAGCCAAAGACAAAGATGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 59 .22 RPM |
| SRP007412_cerebellum | 46 .49 RPM |
| SRP007412_heart | 28 .14 RPM |
| SRP007412_kidney | 178 .28 RPM |
| SRP007412_liver | 88 .71 RPM |
| SRP007412_testis | 95 .62 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012665 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000032168 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000007004 | ortholog_one2one | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000007562 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000006985 | ortholog_one2many | 1 retrogene | |
| Felis catus | ENSFCAG00000022871 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000118680 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000024477 | within_species_paralog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000005189 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000021464 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000005011 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000034868 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006907 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000021304 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000029777 | ortholog_one2one | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000009826 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000009032 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000009836 | ortholog_one2one | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000015733 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000009299 | possible_ortholog | 4 retrogenes | |
| Tarsius syrichta | ENSTSYG00000010418 | ortholog_one2one | 9 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1139 | 92.25 | 75.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1140 | 91.12 | 98.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2330 | 92.44 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2675 | 89.53 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000004051 retrocopies