Parental gene:

CHMP4B, ENSGGOG00000007775

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:20:31159101..31206533(+)


>ENSGGOG00000007775
ATGTCGGTGTTCGGGAAGCTGTTCGGGGCTGGAGGGGGTAAGGCCGGCAAGGGCGGCCCGACCCCCCAGGAGGCCATCCA
GCGGCTGCGGGACACGGAAGAGATGTTAAGCAAGAAACAGGAGTTCCTGGAGAAGAAAATCGAGCAGGAGCTGACGGCCG
CCAAGAAGCACGGCACCAAAAACAAGCGCGCGGCCCTCCAGGCACTGAAGCGTAAGAAGAGGTATGAGAAGCAGCTGGCG
CAGATCGACGGCACATTATCAACCATCGAGTTCCAGCGGGAGGCCCTGGAGAATGCCAACACCAACACCGAGGTGCTCAA
GAACATGGGCTATGCCGCCAAGGCCATGAAGGCGGCCCATGACAACATGGACATCGATAAAGTTGATGAGTTAATGCAGG
ACATTGCTGACCAGCAAGAACTTGCAGAGGAGATTTCAACAGCAATTTCAAAACCTGTAGGGTTTGGAGAAGAGTTTGAC
GAGGATGAGCTCATGGCAGAATTAGAAGAACTAGAACAGGAGGAACTAGACAAGAATTTGCTGGAAATCAGTGGACCCGA
AACAGTCCCTCTACCAAATGTTCCCTCTATAGCCCTACCATCAAAACCCGCCAAGAAGAAAGAAGAGGAGGACGACGACA
TGAAGGAATTGGAGAACTGGGCTGGATCCATGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 154 .99 RPM
SRP007412_cerebellum 90 .66 RPM
SRP007412_heart 52 .53 RPM
SRP007412_kidney 93 .51 RPM
SRP007412_liver 46 .64 RPM
SRP007412_testis 106 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009038 ortholog_one2one 1 retrogene
retro_amel_1612,
Bos taurus ENSBTAG00000013387 possible_ortholog 1 retrogene
retro_btau_1103,
Canis familiaris ENSCAFG00000007478 ortholog_one2one 1 retrogene
retro_cfam_1304,
Choloepus hoffmanni ENSCHOG00000007288 ortholog_one2one 1 retrogene
retro_chof_2518,
Equus caballus ENSECAG00000008311 ortholog_one2one 1 retrogene
retro_ecab_496,
Felis catus ENSFCAG00000025893 ortholog_one2one 1 retrogene
retro_fcat_1835,
Homo sapiens ENSG00000101421 ortholog_one2one 1 retrogene
retro_hsap_1339,
Gorilla gorilla ENSGGOG00000016091 within_species_paralog 1 retrogene
retro_ggor_1697,
Macaca mulatta ENSMMUG00000008084 ortholog_one2one 1 retrogene
retro_mmul_2178,
Mustela putorius furo ENSMPUG00000017821 ortholog_one2one 2 retrogenes
retro_mputfur_1302, retro_mputfur_697,
Nomascus leucogenys ENSNLEG00000010020 ortholog_one2one 1 retrogene
retro_nleu_1822,
Pongo abelii ENSPPYG00000010931 ortholog_one2one 1 retrogene
retro_pabe_1111,
Pan troglodytes ENSPTRG00000013408 ortholog_one2one 1 retrogene
retro_ptro_915,
Pteropus vampyrus ENSPVAG00000010293 ortholog_one2one 1 retrogene
retro_pvam_973,
Rattus norvegicus ENSRNOG00000046585 possible_ortholog 1 retrogene
retro_rnor_61,
Tarsius syrichta ENSTSYG00000013212 ortholog_one2one 1 retrogene
retro_tsyr_1453,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_29 85.63 74.11
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSGGOG00000007775 retrocopies