Parental gene:

PSMC2, ENSGGOG00000009167

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:7:100888353..100909985(+)


>ENSGGOG00000009167
ATGCCGGATTACCTCGGTGCCGATCAGCGGAAGACCAAAGAGGATGAGAAGGACGACAAGCCCATCCGAGCTCTGGATGA
GGGGGATATTGCCTTGTTGAAAACTTATGGTCAGAGCACTTACTCTAGGCAGATCAAGCAAGTTGAAGATGACATTCAGC
AACTTCTCAAGAAAATTAATGAGCTCACTGGTATTAAAGAATCTGACACTGGCCTGGCCCCACCAGCACTCTGGGATTTG
GCTGCGGATAAGCAGACACTCCAGAGTGAACAGCCTTTACAGGTTGCCAGTGTTAGGTGTACAAAGATAATCAATGCTGA
TTCGGAGGACCCAAAATACATTATCAACGTAAAGCAGTTTGCCAAGTTTGTGGTGGACCTTAGTGATCAGGTGGCACCTA
CTGACATTGAAGAAGGGATGAGAGTGGGCGTGGATAGAAATAAATATCAAATTCACATTCCATTGCCTCCTAAGATTGAC
CCAACAGTTACCATGATGCAGGTGGAAGAGAAACCTGATGTCACATACAGTGATGTTGGTGGCTGTAAGGAACAGATTGA
GAAACTGCGAGAAGTAGTTGAAACCCCATTACTTCATCCAGAGAGGTTTGTGAACCTTGGCATTGAGCCTCCCAAGGGCG
TGCTGCTCTTTGGTCCACCCGGTACAGGCAAGACACTCTGTGCGCGGGCAGTTGCTAATCGGACTGATGCGTGCTTCATT
CGAGTTATTGGATCTGAGCTTGTACAGAAATACGTCGGTGAGGGGGCTCGAATGGTTCGTGAACTCTTTGAAATGGCCAG
AACAAAAAAAGCCTGCCTTATCTTCTTTGATGAAATTGATGCTATTGGAGGGGCTCGTTTTGATGATGGTGCTGGAGGTG
ACAATGAAGTGCAGAGAACAATGTTGGAACTGATCAATCAGCTTGATGGTTTTGATCCTCGAGGCAATATTAAAGTGCTG
ATGGCCACTAACAGACCTGATACTTTGGATCCAGCACTGATGAGGCCAGGGAGATTGGATAGAAAAATTGAATTTAGCTT
GCCGGATCTAGAGGGTCGGACCCACATATTTAAGATTCACGCTCGTTCAATGAGTGTTGAAAGAGATATCAGATTTGAAT
TGTTAGCATCAGGCTGCTTTAATTTGAAAGGTGCTGAGATTAGAAGCGTCTGCACAGAGGCTGGTATGTTTGCCATCAGA
GCACGGCGAAAAATTGCTACCGAGAAGGATTTCTTGGAAGCTGTAAATAAGGTCATTAAGTCTTATGCCAAATTCAGTGC
TACTCCTCGTTACATGACATACAACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 48 .82 RPM
SRP007412_cerebellum 37 .66 RPM
SRP007412_heart 17 .60 RPM
SRP007412_kidney 53 .32 RPM
SRP007412_liver 36 .48 RPM
SRP007412_testis 79 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000005729 ortholog_one2one 1 retrogene
retro_etel_1316,
Homo sapiens ENSG00000161057 ortholog_one2one 2 retrogenes
retro_hsap_2705, retro_hsap_3980,
Myotis lucifugus ENSMLUG00000008853 ortholog_one2one 1 retrogene
retro_mluc_1642,
Macaca mulatta ENSMMUG00000003432 ortholog_one2one 2 retrogenes
retro_mmul_1538, retro_mmul_2299,
Monodelphis domestica ENSMODG00000017238 ortholog_one2one 1 retrogene
retro_mdom_868,
Mustela putorius furo ENSMPUG00000018268 ortholog_one2one 3 retrogenes
retro_mputfur_1025, retro_mputfur_232, retro_mputfur_387,
Nomascus leucogenys ENSNLEG00000009274 ortholog_one2one 2 retrogenes
retro_nleu_1578, retro_nleu_2042,
Otolemur garnettii ENSOGAG00000005164 ortholog_one2one 2 retrogenes
retro_ogar_2198, retro_ogar_2309,
Pongo abelii ENSPPYG00000017883 ortholog_one2one 2 retrogenes
retro_pabe_2257, retro_pabe_2412,
Pan troglodytes ENSPTRG00000019553 ortholog_one2one 2 retrogenes
retro_ptro_1826, retro_ptro_2702,
Tarsius syrichta ENSTSYG00000000666 ortholog_one2one 4 retrogenes
retro_tsyr_1031, retro_tsyr_1272, retro_tsyr_1857, retro_tsyr_2178,
Vicugna pacos ENSVPAG00000008921 ortholog_one2one 1 retrogene
retro_vpac_44,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1885 90.14 100.00
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2. retro_ggor_2672 73.01 51.73
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3. retro_ggor_2673 73.01 51.73
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Download FASTA sequences of all ENSGGOG00000009167 retrocopies