Parental gene: | EIF3F, ENSGGOG00000011702 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 11:8039590..8048901(+) |
>ENSGGOG00000011702
ATGAATGCTGTCATTTCCGCTTCTGCCTCCTTCTTTCTCGACAAGATGGCCACATCGGCGGTACCATCAAGTGCTCCTCC
GGCCACGCCAGCCCCAGTCCCGGCGGCGGCCCCAGCCTCAGTTCCAGCGCCAACGCCAGCACCGGCTGCGGCTCCGGTTC
CCGCTGCGGCTCCAGCCTCATCCTCAGACCCTGCGGCAGCAGCGGCTACAACTGCGGCTCCTGGCCAGACCCCGGCCTCA
GCGCAAGCTCCAGCGCAGACCCCAGCGCCTGCTCTGCCTGGTCCTGCTCTTCCAGGGCCCTTCCCCGGCGGCCGCGTGGT
CAGGCTGCACCCAGTCATTTTGGCCTCCATTGTGGACAGCTACGAGAGACGCAACGAGGGTGCTGCCCGAGTTATCGGGA
CCCTGTTGGGAACTGTCGACAAACACTCAGTGGAGGTCACCAATTGCTTTTCAGTGCCGCACAATGAGTCAGAAGATGAA
GTGGCTGTTGACATGGAATTTGCTAAGAATATGTATGAACTGCATAAAAAAGTTTCTCCAAATGAGCTCATCCTGGGCTG
GTACGCTACAGGCCATGACATCACAGAGCACTCTGTGCTGATCCATGAGTACTACAGCCGAGAGGCCCCCAACCCCATCC
ACCTCACTGTGGACACAAGTCTCCAGAACGGCCGCATGAGCATCAAAGCCTATGTCAGCACTTTAATGGGTGTCCCTGGG
AGGACCATGGGAGTGATGTTCACACCTCTGACAGTGAAATACGCATACTATGACACTGAACGCATCGGAGTTGACCTGAT
CATGAAGACCTGCTTTAGCCCCAACAGAGTGATTGGACTCTCAAGTGACTTGCAGCAAGTAGGAGGGGCATCAGCCCGCA
TCCAGGATGCCCTGAGTACAGTGTTGCAATATGCAGAGGATGTACTGTCTGGAAAGGTGTCAGCTGACAATACTGTGGGC
CGCTTCCTGATGAGCCTGGTTAACCAAGTACCGAAAATAGTTCCCGATGACTTTGAGACCATGCTCAACAGCAACATCAA
TGACCTTTTGATGGTGACCTACCTGGCCAACCTCACACAGTCACAGATTGCCCTCAATGAAAAACTTGTAAACCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 46 .61 RPM |
| SRP007412_cerebellum | 57 .56 RPM |
| SRP007412_heart | 45 .81 RPM |
| SRP007412_kidney | 138 .61 RPM |
| SRP007412_liver | 109 .23 RPM |
| SRP007412_testis | 106 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000004861 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000011903 | possible_ortholog | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000001226 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000002717 | possible_ortholog | 2 retrogenes | |
| Homo sapiens | ENSG00000175390 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000009774 | within_species_paralog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000825 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000004225 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003220 | possible_ortholog | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000003326 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000015764 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1566 | 91.95 | 72.73 | Please wait, loading  |
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| 2. | retro_ggor_1567 | 89.63 | 79.57 | Please wait, loading |
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| 3. | retro_ggor_1568 | 91.33 | 79.84 | Please wait, loading |
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| 4. | retro_ggor_1589 | 89.97 | 79.57 | Please wait, loading |
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| 5. | retro_ggor_1590 | 89.67 | 79.84 | Please wait, loading |
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Download FASTA sequences of all ENSGGOG00000011702 retrocopies