Parental gene:

EIF3F, ENSOCUG00000004225

Aliases:None
Description:eukaryotic translation initiation factor 3, subunit F [Source:HGNC Symbol;Acc:3275]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:1:149745876..149755514(+)


>ENSOCUG00000004225
ATGGCCACCCCAGCAGTCTCCGCGAGTGCGCCTCCTGCCACTCCAGCCGCAACCCCGGCTGCAGCTGCCGCTCCAGCCTC
CGCCCCGGCCGCGGCGCCAGCGCCAACGCCGGCTCCAGCGCCGGCTGCAGCTCCTGCCGCGGGAGCGGCTCCGGCCGCAG
CCGCAGACCCTGCGGCGGCGGCGGCGGCTGCGGGTACGGGCCAGACCCCGGCCTCCGCACAAGCCCCCGCGCAGACCTCG
GCGCCCTCGCTGCCTGGTCCCGCGCTGCCAGGGCCCTTCCCCGGCGGCCGCGTGGTCAGGCTGCACCCGGTCATTTTGGC
CTCCATCGTAGACAGTTACGAGAGACGCAACGAAGGCGCTGCCCGAGTGATCGGGACCCTGCTGGGAACTGTTGACAAGC
ACTCAGTGGAGGTCACCAATTGTTTCTCAGTGCCGCACAACGAGTCAGAAGATGAAGTGGCTGTTGACATGGAATTTGCT
AAGAACATGTATGAATTGCACAAAAAAGTCTCTCCAAATGAACTCATCCTGGGCTGGTACGCTACAGGCCATGACATCAC
GGAGCACTCCGTGCTGATCCACGAGTACTACAGCCGGGAGGCCCCTAACCCCATTCACCTCACTGTGGATACGAGTCTTC
AGAATGGCCGCATGAGCATCAAGGCCTACGTCAGCACTTCAATGGGTGTCCCAGGGCGGACCATGGGAGTGATGTTCACA
CCTCTGACAGTGAAATATGCCTATTATGACACTGAACGCATTGGAGTTGACCTGATCATGAAGACCTGTTTTAGCCCCAA
CCGGGTGATTGGACTCTCGAGTGACTTGCAGCAAGTAGGAGGGGCCTCCGCTCGCATCCAAGATGCCCTGAGCACGGTGT
TGCAGTACGCAGAGGATGTGCTGTCTGGAAAGGTGTCAGCTGACAACACTGTGGGCCGCTTCTTGATGAGCCTGGTTAAC
CAAGTGCCCAAAATAGTTCCCGACGACTTCGAGACCATGCTCAACAGCAACATCAATGACTTGCTGATGGTGACGTACCT
GGCCAATCTCACACAGTCACAGATCGCCCTCAATGAGAAACTTGTAAACCTGTGA

Library Parental gene expression (RPM)
SRP017611_brain 98 .62 RPM
SRP017611_kidney 118 .89 RPM
SRP017611_liver 39 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000004861 ortholog_one2one 1 retrogene
retro_btau_527,
Callithrix jacchus ENSCJAG00000011903 possible_ortholog 1 retrogene
retro_cjac_1416,
Echinops telfairi ENSETEG00000002717 possible_ortholog 2 retrogenes
retro_etel_1583, retro_etel_35,
Gorilla gorilla ENSGGOG00000011702 possible_ortholog 5 retrogenes
retro_ggor_1566, retro_ggor_1567, retro_ggor_1568, retro_ggor_1589, retro_ggor_1590,
Myotis lucifugus ENSMLUG00000000825 ortholog_one2one 1 retrogene
retro_mluc_2356,
Otolemur garnettii ENSOGAG00000003220 ortholog_one2many 3 retrogenes
retro_ogar_3041, retro_ogar_859, retro_ogar_863,
Pongo abelii ENSPPYG00000003512 possible_ortholog 1 retrogene
retro_pabe_175,
Pteropus vampyrus ENSPVAG00000015764 ortholog_one2one 1 retrogene
retro_pvam_371,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1488 77.78 86.52
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Download FASTA sequences of all ENSOCUG00000004225 retrocopies