Parental gene:

PSAT1, ENSGGOG00000015480

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:9:60001212..60033116(+)


>ENSGGOG00000015480
ATGGACGCCCCCAGGCAGGTGGTCAACTTTGGGCCTGGTCCCGCCAAGCTGCCGCACTCAGTGTTGTTAGAGATACAAAA
GGAATTATTAGACTACAAAGGAGTTGGCATTAGTGTTCTTGGAGAAATGAGTCACAGGTCATCAGATTTTGCCAAGATTA
TTAACAATACAGAGAATCTTGTGCGGGAATTGCTAGCTGTTCCAGACAACTATAAGGTGATTTTTCTGCAAGGAGGTGGG
TGCGGCCAGTTCAGTGCTGTCCCCTTAAACCTCATTGGCTTGAAAGCAGGAAGGTGTGCGGACTATGTGGTGACAGGAGC
TTGGTCAGCTAAGGCCGCAGAAGAAGCCAAGAAGTTTGGGACTATAAATATCGTTCACCCTAAACTTGGGAGTTATACAA
AAATTCCAGATCCAAGCACCTGGAACCTCAACCCAGATGCCTCCTACGTGTATTATTGCGCAAATGAGACAGTGCATGGT
GTGGAGTTTGACTTTATACCCGATGTCAAGGGAGCAGTACTGGTTTGTGACATGTCCTCAAACTTCCTGTCCAAGCCAGT
GGATGTTTCCAAGTTTTTTTTTTTTTTCCCACAGAGTCTAATGACCATAGGCCCTGGGAACTTTGATTTAATTGTGCTGG
GGGACTTTCTGGTGTCCTTTTCTAAGCCCTGGTGCACAGGGACTATTTTGTATTGCTTTAAAAAATTTATAACAGTGATA
TACTCTTATGGGCCCTGCTTTTGTCTTGTCATCTACGTCATGGGCTTGGTTCTGGAGTGGATTAAAAACAATGGAGGTGC
CGCGGCCATGGAGAAGCTTAGCTCCATCAAATCTCAAACAATTTATGAGATTATTGATAATTCTCAAGGATTCTACGTTT
GTCCAGTGGAGCCCCAAAATAGAAGCAAGATGAATATTCCATTCCGCATTGGCAATGCCAAAGGAGATGATGCTTTAGAA
AAAAGATTTCTTGATAAAGCTCTTGAACTCAATATGTTGTCCTTAAAAGGGCATAGGTCTGTGGGAGGCATCCGGGCCTC
TCTGTATAATGCTGTCACAATTGAAGATGTTCAGAAGCTGGCCGCCTTCATGAAAAAATTTTTGGAGATGCATCAGCTAT
GA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 20 .52 RPM
SRP007412_cerebellum 12 .92 RPM
SRP007412_heart 0 .25 RPM
SRP007412_kidney 159 .38 RPM
SRP007412_liver 20 .07 RPM
SRP007412_testis 8 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006898 ortholog_one2many 1 retrogene
retro_amel_375,
Bos taurus ENSBTAG00000013960 ortholog_one2one 1 retrogene
retro_btau_1658,
Canis familiaris ENSCAFG00000001570 ortholog_one2one 1 retrogene
retro_cfam_269,
Choloepus hoffmanni ENSCHOG00000003817 ortholog_one2one 1 retrogene
retro_chof_2702,
Callithrix jacchus ENSCJAG00000003319 ortholog_one2many 1 retrogene
retro_cjac_1203,
Echinops telfairi ENSETEG00000004158 ortholog_one2one 1 retrogene
retro_etel_99,
Loxodonta africana ENSLAFG00000017917 ortholog_one2one 2 retrogenes
retro_lafr_1249, retro_lafr_660,
Macaca mulatta ENSMMUG00000011868 possible_ortholog 2 retrogenes
retro_mmul_1029, retro_mmul_2341,
Mustela putorius furo ENSMPUG00000012566 ortholog_one2one 1 retrogene
retro_mputfur_808,
Oryctolagus cuniculus ENSOCUG00000007765 ortholog_one2one 1 retrogene
retro_ocun_1092,
Rattus norvegicus ENSRNOG00000013971 ortholog_one2one 1 retrogene
retro_rnor_1663,
Tupaia belangeri ENSTBEG00000012946 ortholog_one2one 1 retrogene
retro_tbel_1577,
Tarsius syrichta ENSTSYG00000000093 ortholog_one2one 2 retrogenes
retro_tsyr_1073, retro_tsyr_1212,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_407 90.52 58.66
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Download FASTA sequences of all ENSGGOG00000015480 retrocopies