Parental gene:

VTA1, ENSGGOG00000015524

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:6:142980121..143053233(+)


>ENSGGOG00000015524
ATGGCCGCGCTTGCACCGCTGCCCCCGCTCCCCGCACAGTTCAAGAGCATACAGCATCATCTGAGGACGGCTCAGGAGCA
TGACAAGCGAGACCCTGTGGTGGCTTATTACTGTCGTTTATACGCAATGCAGACTGGAATGAAGATCGATAGTAAAACTC
CTGAATGTCGCAAATTTTTATCAAAGTTAATGGATCAGTTAGAAGCTCTAAAGAAGCAGTTGGGTGATAATGAAGCTATT
ACTCAAGAAATAGTGGGTTGTGCCCATTTGGAGAATTATGCTTTGAAAATGTTTTTGTATGCAGACAATGAAGATCGTGC
TGGACGATTTCACAAAAACATGATCAAGTCCTTCTATACTGCAAGTCTTTTGATAGATGTCATAACAGTATTTGGAGAAC
TCACTGATGAAAATGTGAAACACAGGAAGTACGCCAGATGGAAGGCAACATACATCCATAATTGTTTGAAGAATGGGGAG
ACTCCTCAAGCAGGCCCTGTTGGAATTGAAGAAGATAATGATATTGAAGAAAATGAAGATGCTGGAGCAGCCTCTCTGCC
CACTCAGCCAACTCAGCCATCATCATCTTCAGCTTATGACCCAAGCAACATGCCATCAGGCAACTATACTGGAATACAGA
TTCCTCCGGGTGCACACGCTCCAGCTAATACACCAGCAGAAGTGCCTCACAGCACAGGTGTAGCAAGTAATACTATCCAA
CCTACTCCACAGACTATACCTGCCATTGATCCCGCACTTTTCAATACAATTTCCCAGGGGGATGTTCGTCTAACCCCAGA
AGACTTTGCTAGAGCTCAGAAGTACTGCAAATATGCTGGCAGTGCTTTGCAGTATGAAGATGTAAACACTGCTGTCCAGA
ATCTACAAAAGGCTCTCAAGTTACTGACGACAGGCAGAGAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 30 .64 RPM
SRP007412_cerebellum 24 .31 RPM
SRP007412_heart 3 .88 RPM
SRP007412_kidney 20 .24 RPM
SRP007412_liver 16 .35 RPM
SRP007412_testis 19 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000009844 ortholog_one2one 1 retrogene
retro_hsap_4088,
Microcebus murinus ENSMICG00000004420 ortholog_one2one 2 retrogenes
retro_mmur_1290, retro_mmur_290,
Macaca mulatta ENSMMUG00000023012 ortholog_one2one 1 retrogene
retro_mmul_751,
Nomascus leucogenys ENSNLEG00000015053 ortholog_one2one 1 retrogene
retro_nleu_1911,
Oryctolagus cuniculus ENSOCUG00000002554 ortholog_one2one 10 retrogenes
retro_ocun_1543, retro_ocun_1689, retro_ocun_1790, retro_ocun_1810, retro_ocun_1821, retro_ocun_1832, retro_ocun_1848, retro_ocun_1853, retro_ocun_1864, retro_ocun_965,
Pan troglodytes ENSPTRG00000018662 ortholog_one2one 1 retrogene
retro_ptro_2773,
Rattus norvegicus ENSRNOG00000011540 ortholog_one2one 1 retrogene
retro_rnor_799,
Tursiops truncatus ENSTTRG00000014998 ortholog_one2one 1 retrogene
retro_ttru_1825,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2742 68.93 57.00
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Download FASTA sequences of all ENSGGOG00000015524 retrocopies