Parental gene:

DEPDC1, ENSGGOG00000016316

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:1:70606228..70627931(-)


>ENSGGOG00000016316
ATGGAGAGTCAGGGTGTGCCTCCCGGGCCTTATCGGGCCACCAAGCTGTTTCCTGCAACTTCGCCACTTAAAACTCTACC
ACGAAGGTATCCAGAATTGAGCAAAAACAACATAGAGAACTTTTCCAAAGATAAAGATAGCATTTTTAAATTACGAAACT
TATCTCGTAGAACTCCTAAAAGGCATGGATTACATTTATCTCAGGAAAATGGCGAGAAAATAAAGCATGAAATAATCAAT
GAAGATCAAGAAAATGCAATTGATAATAGAGAACTAAGCCAGGAAGATGTTGAAGAAGTTTGGAGATATGTTATTCTGAT
CTACCTGCAAACCATTTTAGGTGTGCCATCCCTAGAAGAAGTCATAAATCCAAAACAAGTAATTCCCCAATATATAATGT
ACAACATGGCCAATACAAGTAAACGTGGAGTAGTTATACTACAAAACAAATCAGATGACCTCCCTCACTGGGTATTATCT
GCCATGAAGTGCCTAGCAAATTGGCCAAGAAGCAATGATATGAATAATCCAACTTATGTTGGATTTGAACGAGATGTATT
CAGAACAATCGCAGAGTATTTTCTAGATCTCCCTGAACCTCTACTTACTTTTGAATATTACGAATTATTTGTAAACATTT
TGGTTGTTTGTGGCTACATCACAGTTTCAGATAGATCCAGTGGGATACATAAAATCCAAGATGATCCACAGTCTTCAAAA
TTCCTTCACTTAAACAATTTGAATTCCTTCAAATCAACTGAGTGCCTTCTTCTCAGTCTGCTTCATAGAGAAAAAAACAA
AGAAGAATCAGATTCTACTGAGAGACTACAGATAAGCAATCCAGGATTTCAAGAAAGATGTGCTAAGAAAATGCAGCTAG
TTAATTTAAGAAACAGAAGAGTGAGTGCTAATGACATAATGGGAGGAAGTTGTCATAATTTAATAGGGTTAAGTAATATG
CATGATCTATCCTCTAACAGCAAACCAAGGTGCTGTTCTTTGGAAGGAATTGTAGATGTGTCAGGGAATTCAAGTAAAGA
GGCATCCAGTGTCTTTCATCAATCTTTTCCGAACATAGAAGGACAAAATAATAAACTGTTTTTAGAGTCTAAGCCCAAAC
AGGAATTCCTATTGAATCTTCATTCAGAGGAAAATATTCAAAAGCCATTCAGTGCTGGTTTTAAGAGAACCTCTACTTTG
ACTGTTCAAGACCAAGAGGAGTTGTGTAATGGGAAATGCAAGTCAAAACAGCTTTGTAGGTCTCAGAGTTTGCTTTTAAG
AAGTAGTACAAGAAGGAATAGTTATATCAATACACCAGTGGCTGAAATTGTCATGAAACCAAATGTTGGACAAGGCAGCA
CAAGTGTGCAAACAGCTATGGAAAGAGAACTCGGAGAGTCTAGTGCCACAATCAATAAAAGACTCTGCAAAAGTACAATA
GAACTTTCAGAAAATTCTTTACTTCCAGCTTCTTCTATGTTGACTGGCACACAAAGCTTGCTGCAACCTCATTTAGAGAG
GGTTGCCATCGATGCTCTACAGTTATGTTGTTTGTTACTTCCCCCACCAAATCGTAGAAAGCTTCAACTTTTAATGCGTA
TGATTTCCCGAATGAGTCAAAATGTTGATATGCCCAAACTTCATGATGCAATGGGTACGAGGTCACTGATGATACATACC
TTTTCTCGATGTGTGTTATGCTGTGCTGAAGAAGTGGATCTTGATGAGCTTCTTGCTGGAAGATTAGTTTCTTTCTTAAT
GGATCATCATCAGGAAATTCTTCAAGTACCCTCTTACTTACAGACTGCAGTGGAAAAACATCTTGACTACTTAAAAAAGG
GACATATTGAAAATCCTGGAGATGGACTATTTGCTCCTTTGCCAACTTACTCATACTGTAAGCAGATTAGTGCTCAGGAG
TTTGATGAGCAGAAAGTTTCTACCTCTCAAGCTGCAATTGCAGAACTTTTAGAAAATATTATTAAAAACAGGAGTTTACC
TCTAAAGGAGAAAAGAAAAAAACTAAAACAGTTTCAGAAGGAATATCCTTTGATATATCAGAAAAGATTTCCAACCACGG
AGAGTGAAGCAGCACTTTTTGGTGACAAACCTACAATCAAGCAACCAATGCTGATTTTAAGAAAACCAAAGTTCCGTAGT
CTAAGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .03 RPM
SRP007412_kidney 0 .04 RPM
SRP007412_liver 0 .05 RPM
SRP007412_testis 41 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000013839 ortholog_one2many 1 retrogene
retro_cpor_735,
Homo sapiens ENSG00000024526 ortholog_one2one 2 retrogenes
retro_hsap_1545, retro_hsap_4206,
Macaca mulatta ENSMMUG00000017766 ortholog_one2one 1 retrogene
retro_mmul_1176,
Mus musculus ENSMUSG00000028175 ortholog_one2many 1 retrogene
retro_mmus_3028,
Nomascus leucogenys ENSNLEG00000009334 ortholog_one2one 1 retrogene
retro_nleu_2931,
Otolemur garnettii ENSOGAG00000000934 ortholog_one2many 1 retrogene
retro_ogar_1907,
Pongo abelii ENSPPYG00000001248 ortholog_one2one 1 retrogene
retro_pabe_3441,
Pan troglodytes ENSPTRG00000000847 ortholog_one2one 2 retrogenes
retro_ptro_1041, retro_ptro_2855,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1176 92.24 62.19
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSGGOG00000016316 retrocopies