Parental gene: | DEPDC1, ENSPTRG00000000847 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 1:69099756..69119974(-) |
>ENSPTRG00000000847
ATGGAGAGTCAGGGTGTGCCTCCCGGGCCTTATCGGGCCACCAAGCTGTGGAATGAAGTTACCACATCTTTTCGAGCAGG
AATGCCTCTAAGAAAACACAGACAACACTTTAAAAAATATGGCAATTGTTTCACAGCAGGAGAAGCAGTGGATTGGCTTT
ATGACCTATTAAGAAATAATAGCAATTTTGGTCCTGAAGTTACAAGGCAACAGACTATCCAACTGTTGAGGAAATTTCTT
AAGAATCATGTAATTGAAGATATCAAAGGGAGGTGGGGATCAGAAAATGTTGATGATAACAACCAGCTCTTCAGATTTCC
TGCAACTTCGCCACTTAAAACTCTACCACGAAGGTATCCAGAATTGAGAAAAAACAACATAGAGAACTTTTCCAAAGATA
AAGATAGCATTTTTAAATTACGAAACTTATCTCGTAGAACTCCTAAAAGGCATGGATTACATTTATCTCAGGAAAATGGC
GAGAAAATAAAGCATGAAATAATCAATGAAGATCAAGAAAATGCAATTGATAATAGAGAACTAAGCCAGGAAGATGTTGA
AGAAGTTTGGAGATATGTTATTCTGATCTACCTGCAAACCATTTTAGGTGTGCCATCCCTAGAAGAAGTCATAAATCCAA
AACAAGTAATTCCCCAATATATAATGTACAACATGGCCAATACAAGTAAACGTGGAGTAGTTATACTACAAAACAAATCA
GATGACCTCCCTCACTGGGTATTATCTGCCATGAAGTGCCTAGCAAATTGGCCAAGAAGCAATGATATGAATAATCCAAC
TTATGTTGGATTTGAACGAGATGTATTCAGAACAATCGCAGATTATTTTCTAGATCTCCCTGAACCTCTACTTACTTTTG
AATATTACGAATTATTTGTAAACATTTTGGTTGTTTGTGGCTACATCACAGTTTCAGATAGATCCAGTGGGATACATAAA
ATTCAAGATGATCCACAGTCTTCAAAATTCCTTCACTTAAACAATTTGAATTCCTTCAAATCAACTGAGTGCCTTCTTCT
CAGTCTGCTTCATAGAGAAAAAAACAAAGAAGAATCAGATTCTACTGAGAGACTACAGATAAGCAATCCAGGATTTCAAG
AAAGATGTGCTAAGAAAATGCAGCTAGTTAATTTAAGAAACAGAAGAGTGAGTGCTAATGACATAATGGGAGGAAGTTGT
CATAATTTAATAGGGTTAAGTAATATGCATGATCTATCCTCTAACAGCAAACCAAGGTGCTGTTCTTTGGAAGGAATTGT
AGATGTGCCAGGGAATTCAAGTAAAGAGGCATCCAGTGTCTTTCATCAATCTTTTCCGAACATAGAAGGACAAAATAATA
AACTGTTTTTAGAGTCTAAGCCCAAACAGGAATTCCTGTTGAATCTTCATTCAGAGGAAACTATTCAAAAGCCATTCAGT
GCTGGTTTTAAGAGAAACTCTACTTTGACTGTTCAAGACCAAGAGGAGTTGTATAATGGGAAATGCAAGTCAAAACAGCT
TTGTAGGTCTCAGAGTTTGCTTTTAAGAAGTAGTACAAGAAGGAATAGTTATATCAATACACCAGTGGCTGAAATTATCA
TGAAACCAAATGTTGGACAAGGCAGCACAAGTGTGCAAACAGCTATGGAAAGTGAACTCGGAGAGTCTAGTGCCACAATC
AATAAAAGACTCTGCAAAAGTACAATAGAACTTTCAGAAAATTCTTTACTTCCAGCTTCTTCTATGTTGACTGGCACACA
AAGCTTGCTGCAACCTCATTTAGAGAGGGTTGCCATCGATGCTCTACAGTTATGTTGTTTGTTACTTCCCCCACCAAATC
GTAGAAAGCTTCAACTTTTAATGCGTATGATTTCCCGAATGAGTCAAAATGTTGATATGCCCGAACTTCATGATGCAATG
GGTACGAGGTCACTGATGATACATACCTTTTCTCGATGTGTGTTATGCTGTGCTGAAGAAGTGGATCTTGATGAGCTTCT
TGCTGGAAGATTAGTTTCTTTCTTAATGGATCATCATCAGGAAATTCTTCAAGTACCCTCTTACTTACAGACTGCAGTGG
AAAAACATCTTGACTACTTAAAAAAGGGACATATTGAAAATCCTGGAGATGGACTATTTGCTCCTTTGCCAACTTACTCA
TACTGTAAGCAGATTAGTGCTCAGGAGTTTGATGAGCAAAAAGTTTCTACCTCTCAAGCTGCAATTGCAGAACTTTTAGA
AAATATTATTAAAAACAGGAGTTTACCTCTAAAGGAGAAAAGAAAAAAACTAAAACAGTTTCAGAAGGAATATCCTTTGA
TATATCAGAAAAGATTTCCAACCACGGAGAGTGAAGCAGCACTTTTTGGTGACAAACCTACAATCAAGCAACCAATGCTG
ATTTTAAGAAAACCAAAGTTCCGTAGTCTAAGATACTAA
ATGGAGAGTCAGGGTGTGCCTCCCGGGCCTTATCGGGCCACCAAGCTGTGGAATGAAGTTACCACATCTTTTCGAGCAGG
AATGCCTCTAAGAAAACACAGACAACACTTTAAAAAATATGGCAATTGTTTCACAGCAGGAGAAGCAGTGGATTGGCTTT
ATGACCTATTAAGAAATAATAGCAATTTTGGTCCTGAAGTTACAAGGCAACAGACTATCCAACTGTTGAGGAAATTTCTT
AAGAATCATGTAATTGAAGATATCAAAGGGAGGTGGGGATCAGAAAATGTTGATGATAACAACCAGCTCTTCAGATTTCC
TGCAACTTCGCCACTTAAAACTCTACCACGAAGGTATCCAGAATTGAGAAAAAACAACATAGAGAACTTTTCCAAAGATA
AAGATAGCATTTTTAAATTACGAAACTTATCTCGTAGAACTCCTAAAAGGCATGGATTACATTTATCTCAGGAAAATGGC
GAGAAAATAAAGCATGAAATAATCAATGAAGATCAAGAAAATGCAATTGATAATAGAGAACTAAGCCAGGAAGATGTTGA
AGAAGTTTGGAGATATGTTATTCTGATCTACCTGCAAACCATTTTAGGTGTGCCATCCCTAGAAGAAGTCATAAATCCAA
AACAAGTAATTCCCCAATATATAATGTACAACATGGCCAATACAAGTAAACGTGGAGTAGTTATACTACAAAACAAATCA
GATGACCTCCCTCACTGGGTATTATCTGCCATGAAGTGCCTAGCAAATTGGCCAAGAAGCAATGATATGAATAATCCAAC
TTATGTTGGATTTGAACGAGATGTATTCAGAACAATCGCAGATTATTTTCTAGATCTCCCTGAACCTCTACTTACTTTTG
AATATTACGAATTATTTGTAAACATTTTGGTTGTTTGTGGCTACATCACAGTTTCAGATAGATCCAGTGGGATACATAAA
ATTCAAGATGATCCACAGTCTTCAAAATTCCTTCACTTAAACAATTTGAATTCCTTCAAATCAACTGAGTGCCTTCTTCT
CAGTCTGCTTCATAGAGAAAAAAACAAAGAAGAATCAGATTCTACTGAGAGACTACAGATAAGCAATCCAGGATTTCAAG
AAAGATGTGCTAAGAAAATGCAGCTAGTTAATTTAAGAAACAGAAGAGTGAGTGCTAATGACATAATGGGAGGAAGTTGT
CATAATTTAATAGGGTTAAGTAATATGCATGATCTATCCTCTAACAGCAAACCAAGGTGCTGTTCTTTGGAAGGAATTGT
AGATGTGCCAGGGAATTCAAGTAAAGAGGCATCCAGTGTCTTTCATCAATCTTTTCCGAACATAGAAGGACAAAATAATA
AACTGTTTTTAGAGTCTAAGCCCAAACAGGAATTCCTGTTGAATCTTCATTCAGAGGAAACTATTCAAAAGCCATTCAGT
GCTGGTTTTAAGAGAAACTCTACTTTGACTGTTCAAGACCAAGAGGAGTTGTATAATGGGAAATGCAAGTCAAAACAGCT
TTGTAGGTCTCAGAGTTTGCTTTTAAGAAGTAGTACAAGAAGGAATAGTTATATCAATACACCAGTGGCTGAAATTATCA
TGAAACCAAATGTTGGACAAGGCAGCACAAGTGTGCAAACAGCTATGGAAAGTGAACTCGGAGAGTCTAGTGCCACAATC
AATAAAAGACTCTGCAAAAGTACAATAGAACTTTCAGAAAATTCTTTACTTCCAGCTTCTTCTATGTTGACTGGCACACA
AAGCTTGCTGCAACCTCATTTAGAGAGGGTTGCCATCGATGCTCTACAGTTATGTTGTTTGTTACTTCCCCCACCAAATC
GTAGAAAGCTTCAACTTTTAATGCGTATGATTTCCCGAATGAGTCAAAATGTTGATATGCCCGAACTTCATGATGCAATG
GGTACGAGGTCACTGATGATACATACCTTTTCTCGATGTGTGTTATGCTGTGCTGAAGAAGTGGATCTTGATGAGCTTCT
TGCTGGAAGATTAGTTTCTTTCTTAATGGATCATCATCAGGAAATTCTTCAAGTACCCTCTTACTTACAGACTGCAGTGG
AAAAACATCTTGACTACTTAAAAAAGGGACATATTGAAAATCCTGGAGATGGACTATTTGCTCCTTTGCCAACTTACTCA
TACTGTAAGCAGATTAGTGCTCAGGAGTTTGATGAGCAAAAAGTTTCTACCTCTCAAGCTGCAATTGCAGAACTTTTAGA
AAATATTATTAAAAACAGGAGTTTACCTCTAAAGGAGAAAAGAAAAAAACTAAAACAGTTTCAGAAGGAATATCCTTTGA
TATATCAGAAAAGATTTCCAACCACGGAGAGTGAAGCAGCACTTTTTGGTGACAAACCTACAATCAAGCAACCAATGCTG
ATTTTAAGAAAACCAAAGTTCCGTAGTCTAAGATACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .11 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .06 RPM |
| SRP007412_kidney | 0 .03 RPM |
| SRP007412_liver | 0 .16 RPM |
| SRP007412_testis | 38 .89 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000013839 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000024526 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016316 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000017766 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000028175 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009334 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000934 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001248 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1041 | 92.02 | 59.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2855 | 86.84 | 81.03 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000000847 retrocopies