Parental gene: | GXYLT1, ENSGGOG00000027928 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 12:39807563..39865374(-) |
>ENSGGOG00000027928
ATGCGGCGCTACCTGCGCGTCGTGGTGCTGTGTGTGGCCTGCGGCTTCTGCTCGCTCCTTTACGCTTTCAGCCAGCTCGC
CGTGTCCCTGGAAGAAGGAGCGGGCGGCGGTGGCGGGAAGCCGCAGGCCGCAGTGGCTTCCTGGCTCGCGGGCGGCGGAC
GCGGCGCCGTGAGAGGCGCCGGCGTCGCTGGCCCAGCAGCGCATCCCGGCGGGTCGGACAGGTGTAAAGATTTCTCTCTG
TGTTACTGGAATCCCTATTGGATGCTGCCCTCTGATGTTTGTGGAATGAACTGCTTTTGGGAAGCGGCTTTTAGGTATAG
TCTGAAAATACAGCCTGTTGAGAAAATGCATCTAGCTGTAGTTGCCTGTGGTGAAAGACTGGAAGAAACTATGACCATGT
TGAAGTCAGCTATCATTTTCAGCATCAAACCTCTTCAATTCCATATTTTTGCTGAAGATCAGCTACATCATAGCTTTAAA
GGCAGACTTGACAACTGGTCATTTCTACAAACATTTAATTATACGTTATACCCCATAACCTTTCCAAGTGAGAATGCAGC
AGAGTGGAAAAAACTCTTTAAACCATGTGCTTCGCAGAGATTGTTCTTGCCGTTAATCCTGAAAGAAATTGACTCACTAT
TGTATGTCGACACTGATATCCTTTTTTTACGACCAGTTGATGATATTTGGTCTTTACTAAAGAAATTTAATTCCACACAA
ATTGCTGCAATGGCACCAGAACATGAGGAACCTCGAATAGGATGGTATAATCGCTTTGCTAGGCATCCATATTATGGAAA
AACTGGAGTAAACTCTGGAGTTATGTTGATGAACATGACTCGAATGAGAAGGAAGTATTTCAAGAATGATATGACAACTG
TACGACTACAATGGGGAGATATACTTATGCCATTGCTTAAAAAATACAAACTAAACATCACATGGGGTGATCAAGATCTA
TTGAATATCATGTTTTTTCATAATCCAGAAAGCCTTTTTGTTTTTCCGTGTCAATGGAATTATCGACCAGATCATTGTAT
ATATGGAAGCAATTGCCAAGAAGCAGAAGAAGAAGGAATCTTTATTCTTCATGGGAACAGAGGTGTTTACCATGACGATA
AGCAACCAGCATTTAGAGCTGTTTATGAAGCACTGAGAAATTGTTCTTTTGAAGATGACAACATCCGTTCCTTATTAAAA
CCTTTAGAACTGGAACTACAAAAAACAGTGCATACATACTGTGGAAAAATTTACAAAATATTTATCAAACAACTAGCAAA
AAGTGTAAGAGATCGTTATGCCAGATCACCAAAGGAAAAGTGA
ATGCGGCGCTACCTGCGCGTCGTGGTGCTGTGTGTGGCCTGCGGCTTCTGCTCGCTCCTTTACGCTTTCAGCCAGCTCGC
CGTGTCCCTGGAAGAAGGAGCGGGCGGCGGTGGCGGGAAGCCGCAGGCCGCAGTGGCTTCCTGGCTCGCGGGCGGCGGAC
GCGGCGCCGTGAGAGGCGCCGGCGTCGCTGGCCCAGCAGCGCATCCCGGCGGGTCGGACAGGTGTAAAGATTTCTCTCTG
TGTTACTGGAATCCCTATTGGATGCTGCCCTCTGATGTTTGTGGAATGAACTGCTTTTGGGAAGCGGCTTTTAGGTATAG
TCTGAAAATACAGCCTGTTGAGAAAATGCATCTAGCTGTAGTTGCCTGTGGTGAAAGACTGGAAGAAACTATGACCATGT
TGAAGTCAGCTATCATTTTCAGCATCAAACCTCTTCAATTCCATATTTTTGCTGAAGATCAGCTACATCATAGCTTTAAA
GGCAGACTTGACAACTGGTCATTTCTACAAACATTTAATTATACGTTATACCCCATAACCTTTCCAAGTGAGAATGCAGC
AGAGTGGAAAAAACTCTTTAAACCATGTGCTTCGCAGAGATTGTTCTTGCCGTTAATCCTGAAAGAAATTGACTCACTAT
TGTATGTCGACACTGATATCCTTTTTTTACGACCAGTTGATGATATTTGGTCTTTACTAAAGAAATTTAATTCCACACAA
ATTGCTGCAATGGCACCAGAACATGAGGAACCTCGAATAGGATGGTATAATCGCTTTGCTAGGCATCCATATTATGGAAA
AACTGGAGTAAACTCTGGAGTTATGTTGATGAACATGACTCGAATGAGAAGGAAGTATTTCAAGAATGATATGACAACTG
TACGACTACAATGGGGAGATATACTTATGCCATTGCTTAAAAAATACAAACTAAACATCACATGGGGTGATCAAGATCTA
TTGAATATCATGTTTTTTCATAATCCAGAAAGCCTTTTTGTTTTTCCGTGTCAATGGAATTATCGACCAGATCATTGTAT
ATATGGAAGCAATTGCCAAGAAGCAGAAGAAGAAGGAATCTTTATTCTTCATGGGAACAGAGGTGTTTACCATGACGATA
AGCAACCAGCATTTAGAGCTGTTTATGAAGCACTGAGAAATTGTTCTTTTGAAGATGACAACATCCGTTCCTTATTAAAA
CCTTTAGAACTGGAACTACAAAAAACAGTGCATACATACTGTGGAAAAATTTACAAAATATTTATCAAACAACTAGCAAA
AAGTGTAAGAGATCGTTATGCCAGATCACCAAAGGAAAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 0 .72 RPM |
| SRP007412_cerebellum | 1 .26 RPM |
| SRP007412_heart | 0 .41 RPM |
| SRP007412_kidney | 1 .47 RPM |
| SRP007412_liver | 1 .64 RPM |
| SRP007412_testis | 3 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000151233 | ortholog_one2one | 5 retrogenes | |
| Monodelphis domestica | ENSMODG00000008913 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000036197 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017947 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004419 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000004836 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000005234 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1702 | 80.19 | 72.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1950 | 81.60 | 56.14 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_2798 | 81.78 | 50.68 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000027928 retrocopies