Parental gene: | RHBG, ENSLACG00000001771 |
| Aliases: | None |
| Description: | None |
| Organism: | Coelacanth (Latimeria chalumnae) |
| Coordinates: | JH127154.1:27165..77835(-) |
>ENSLACG00000001771
ATGGCAGAGACGACCAGCAGCATACATCTGAAGCTACCCCTCACCTGTTTCTTTCTGGAGCTGATTACTATCATTCTGTT
TGCAGTGTTTGTTCGCTATGATGATGAGACAGATGCAAAACGTTGGCATGAGTTGCTGAAACACAACAAGACCAACCTGG
ATAATGACTTCTACTATAGATACCCAAGTTTCCAGGATGTGCACGTGATGATTTTTGTTGGGTTCGGGTTTCTCATGACC
TTCCTGAAGCAATACGGGTTTGGAAGCGTCGGCTTCAACTTCCTGCTGGCATCCTTCGGGATTCAGTGGGCAACGCTCAT
TCAGGGCTTCCTTCATGCTTTTGGGGATGATGGGAAGATTCAAATTGGGGTGGAAAGTATGATAAATGCGGAATTCTGCA
CCGGGTCTGTGCTAATCTCTTTCGGAGCGCTTTTGGGCAAAACGAGTCCTGTTCAGCTGCTGGTGATGACACTCTTTGAA
ACAACTTTATTCTCCGTTAATGAATACATCCTCCTAAGCATCGTGGGGGCTAAGGATGCTGGTGGCGCCATGACCATCCA
CACTTTCGGGGCCTATTTTGGACTGATGGTGTCCCGAATCCTTTACCGCCCTAATTTGGACAAAAGCAGGCAGAGGGAGA
AATCGGTCTATCATTCCGATGTCTTTGCAATGATCGGTACCATATTCCTTTGGATGTTTTGGCCCAGCTTTAACTCTGCG
ATTACGGCCCATGGGGACGACCAGCACCGCACTGTTATGAACACATACTACTCCCTCGCTGCCTGCACTCTGGCCACCTA
CATACTCTCGCCGCTCGTCTTTGATGATGGCAAGATCTCCATGGTTCATGTGCAGAATGCAGCTCTGGCAGGCGGGGTAG
CGGCTGGCACGGCTGGTGAAATGATGATGAACCCTTACGGCGCCCTGATTGTTGGCTTCCTCGCTGGAGTCATCTCAACT
CTCGGCTTTCAATACCTCACTCCCATTTTGGATGCCAAGCTTAAAATCCAGGATACCTGTGGAGTCCATAACCTCCATGG
AATGCCAGGAGTCCTTGGAGCGGTGGCGGGCGCTGTTATTGCTGCTTTAGCCACTGAGGAAGTATATGGAGATGGGATGA
GTGACGTGTTCCCGATGATTGCGAGCGGCGAGCGCAACGCGTCCAAACAAGGCGTTTACCAGTTTGTTGCCTTGCTGATT
ACACTGGCCTTTGCCTTTGTTGGCGGAACCATCATAGGGTTTATTTTAAAGCTGCCGATAATGGGATCTCCGTCAGATGC
AGAATGCTTTCTGGATGACCTGTATTGGGAGGTGCCAATGGAAGACGAATGCGATGGAGAACTAAAACCAGTACCCACTG
AACCTGAAGAGAAAGCGTTAAATGCATAA
ATGGCAGAGACGACCAGCAGCATACATCTGAAGCTACCCCTCACCTGTTTCTTTCTGGAGCTGATTACTATCATTCTGTT
TGCAGTGTTTGTTCGCTATGATGATGAGACAGATGCAAAACGTTGGCATGAGTTGCTGAAACACAACAAGACCAACCTGG
ATAATGACTTCTACTATAGATACCCAAGTTTCCAGGATGTGCACGTGATGATTTTTGTTGGGTTCGGGTTTCTCATGACC
TTCCTGAAGCAATACGGGTTTGGAAGCGTCGGCTTCAACTTCCTGCTGGCATCCTTCGGGATTCAGTGGGCAACGCTCAT
TCAGGGCTTCCTTCATGCTTTTGGGGATGATGGGAAGATTCAAATTGGGGTGGAAAGTATGATAAATGCGGAATTCTGCA
CCGGGTCTGTGCTAATCTCTTTCGGAGCGCTTTTGGGCAAAACGAGTCCTGTTCAGCTGCTGGTGATGACACTCTTTGAA
ACAACTTTATTCTCCGTTAATGAATACATCCTCCTAAGCATCGTGGGGGCTAAGGATGCTGGTGGCGCCATGACCATCCA
CACTTTCGGGGCCTATTTTGGACTGATGGTGTCCCGAATCCTTTACCGCCCTAATTTGGACAAAAGCAGGCAGAGGGAGA
AATCGGTCTATCATTCCGATGTCTTTGCAATGATCGGTACCATATTCCTTTGGATGTTTTGGCCCAGCTTTAACTCTGCG
ATTACGGCCCATGGGGACGACCAGCACCGCACTGTTATGAACACATACTACTCCCTCGCTGCCTGCACTCTGGCCACCTA
CATACTCTCGCCGCTCGTCTTTGATGATGGCAAGATCTCCATGGTTCATGTGCAGAATGCAGCTCTGGCAGGCGGGGTAG
CGGCTGGCACGGCTGGTGAAATGATGATGAACCCTTACGGCGCCCTGATTGTTGGCTTCCTCGCTGGAGTCATCTCAACT
CTCGGCTTTCAATACCTCACTCCCATTTTGGATGCCAAGCTTAAAATCCAGGATACCTGTGGAGTCCATAACCTCCATGG
AATGCCAGGAGTCCTTGGAGCGGTGGCGGGCGCTGTTATTGCTGCTTTAGCCACTGAGGAAGTATATGGAGATGGGATGA
GTGACGTGTTCCCGATGATTGCGAGCGGCGAGCGCAACGCGTCCAAACAAGGCGTTTACCAGTTTGTTGCCTTGCTGATT
ACACTGGCCTTTGCCTTTGTTGGCGGAACCATCATAGGGTTTATTTTAAAGCTGCCGATAATGGGATCTCCGTCAGATGC
AGAATGCTTTCTGGATGACCTGTATTGGGAGGTGCCAATGGAAGACGAATGCGATGGAGAACTAAAACCAGTACCCACTG
AACCTGAAGAGAAAGCGTTAAATGCATAA
| Library | Parental gene expression (RPM) |
|---|---|
| DRP000627_pectoral_fin | 10 .55 RPM |
| DRP000627_kidney | 1 .36 RPM |
| DRP000627_pelvic_fin | 3 .30 RPM |
| DRP000627_pharynx | 0 .09 RPM |
| DRP000627_gill | 3 .82 RPM |
| DRP000627_tail_muscle | 0 .17 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000016811 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lcha_13 | 50.40 | 80.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSLACG00000001771 retrocopies