Parental gene: | ENSLACG00000007580 |
| Aliases: | None |
| Description: | None |
| Organism: | Coelacanth (Latimeria chalumnae) |
| Coordinates: | JH127832.1:285487..287722(+) |
>ENSLACG00000007580
TGCCTTTCCATGGTGACAAGATTCTTTTTTTCGCTGCAAAATGGCAACTTTCTGGGATGCCTTGAACTCCTCGGTCACTT
TGATCCACTTTTATCGGACCATCTCACCACATTTGCAGATGCTGGCAAAGGAACGCCTAATTACTTATCTTCCGCCATTT
GTGATGTCTTCATTCAGCTGATGTCTGATAAAGTTCTGAGTGCCATTGTCAGCGAAATTAAATGTTCCAAGTATTATTCT
ATTATCATAGTGGATTCGGCTCCCGACCTAACTCATATTGACCTGCTTACCATTATGCTCAGATATGTGCAGAAGAATGG
AGAACCTACGGAACGTTTTTTGAAACTCATACCAACTCATGGTCACTGTACTGAACATCTGGAGAGAACCATCACATCGT
TGCTGCAAGAACTTGCTATTGATATCAGCGACTGTTGTGGTCAGAGCTATGACAGCGCCAGCAACCTGTCTGGCAAATAC
GCGGGGCTTCGGGCAAGGATTAATAATCGAAACCCTGTTCCGTGTTCTGCACGTTCGCTGAACTTGGTCGGTTCGTGTGC
TGCAGAATGCTGTTTGGCTGCAGTTTCATTTTTCAGCTTTGTTCAAAGTCTGTACAACTTCTTTTCTGCATCAGCGCGTC
GTTGGGAAGTTCTGACATCACATCTTNTGAAGTCTTTACGATTTGGTTGCAATGTCATTCTGGATGCTTTGACTGAAATA
TCTGAACCTGCAAGAGATGATGCAGTGAAGTCTTTACGATTTGGTTGCAATGTCATTCTGGATGCTTTGACTGAAATATC
TGATGATAACGACCAGCCAAAAGCTGCTCAGCGCGAAGCTTGCCAGTTCAGGGCTGCAATGGCCAAACTGGAACTGCAGT
GTTATTGTGACTGTTGGGATGTCATCCTTCAAAGAGTGAATGTTACTAGTAAAACTTTACAGCAAGCGAAGACAGATCTG
GGGTCGGTCTCTGTGTTGTATGACTCACTTATTGACTTTATCAGACAGGTCAGAAATGACTTTGAAACGTACGAAACTGA
GGCAAAAACGCTTCCAAATACTGAGGGGTACAAAGCGGAATCAGAACAGTGTAGGGCTAGGAAAAGAATATTTGTGGAAT
CAGCAACTCCAGAGAAAATCTCAGACCGTGCGATGCGTCTTCTCCCTCAGCTGTCTCCTTACCAACTGTCGCTGACGCAG
CACCTTCAGCGCCGT
TGCCTTTCCATGGTGACAAGATTCTTTTTTTCGCTGCAAAATGGCAACTTTCTGGGATGCCTTGAACTCCTCGGTCACTT
TGATCCACTTTTATCGGACCATCTCACCACATTTGCAGATGCTGGCAAAGGAACGCCTAATTACTTATCTTCCGCCATTT
GTGATGTCTTCATTCAGCTGATGTCTGATAAAGTTCTGAGTGCCATTGTCAGCGAAATTAAATGTTCCAAGTATTATTCT
ATTATCATAGTGGATTCGGCTCCCGACCTAACTCATATTGACCTGCTTACCATTATGCTCAGATATGTGCAGAAGAATGG
AGAACCTACGGAACGTTTTTTGAAACTCATACCAACTCATGGTCACTGTACTGAACATCTGGAGAGAACCATCACATCGT
TGCTGCAAGAACTTGCTATTGATATCAGCGACTGTTGTGGTCAGAGCTATGACAGCGCCAGCAACCTGTCTGGCAAATAC
GCGGGGCTTCGGGCAAGGATTAATAATCGAAACCCTGTTCCGTGTTCTGCACGTTCGCTGAACTTGGTCGGTTCGTGTGC
TGCAGAATGCTGTTTGGCTGCAGTTTCATTTTTCAGCTTTGTTCAAAGTCTGTACAACTTCTTTTCTGCATCAGCGCGTC
GTTGGGAAGTTCTGACATCACATCTTNTGAAGTCTTTACGATTTGGTTGCAATGTCATTCTGGATGCTTTGACTGAAATA
TCTGAACCTGCAAGAGATGATGCAGTGAAGTCTTTACGATTTGGTTGCAATGTCATTCTGGATGCTTTGACTGAAATATC
TGATGATAACGACCAGCCAAAAGCTGCTCAGCGCGAAGCTTGCCAGTTCAGGGCTGCAATGGCCAAACTGGAACTGCAGT
GTTATTGTGACTGTTGGGATGTCATCCTTCAAAGAGTGAATGTTACTAGTAAAACTTTACAGCAAGCGAAGACAGATCTG
GGGTCGGTCTCTGTGTTGTATGACTCACTTATTGACTTTATCAGACAGGTCAGAAATGACTTTGAAACGTACGAAACTGA
GGCAAAAACGCTTCCAAATACTGAGGGGTACAAAGCGGAATCAGAACAGTGTAGGGCTAGGAAAAGAATATTTGTGGAAT
CAGCAACTCCAGAGAAAATCTCAGACCGTGCGATGCGTCTTCTCCCTCAGCTGTCTCCTTACCAACTGTCGCTGACGCAG
CACCTTCAGCGCCGT
| Library | Parental gene expression (RPM) |
|---|---|
| DRP000627_pectoral_fin | 0 .00 RPM |
| DRP000627_kidney | 0 .00 RPM |
| DRP000627_pelvic_fin | 0 .00 RPM |
| DRP000627_pharynx | 0 .00 RPM |
| DRP000627_gill | 0 .00 RPM |
| DRP000627_tail_muscle | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Latimeria chalumnae | ENSLACG00000003023 | within_species_paralog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lcha_84 | 68.41 | 93.33 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSLACG00000007580 retrocopies