Parental gene: | ENSLACG00000011124 |
| Aliases: | None |
| Description: | None |
| Organism: | Coelacanth (Latimeria chalumnae) |
| Coordinates: | JH127062.1:570171..588045(+) |
>ENSLACG00000011124
ATGAGAAGTGGTGCAGCATGGCAGTTTGTCATAGAAAATAACTGGGTGAACTTCACAGTAAATCAGATCCGTGAGATCAT
GGACAAAAAGTCCAACATCCGTAACATGTCTGTGATCGCTCATGTTGATCACGGCAAATCCACCCTGACTGACTCACTGG
TGAGCAAAGCTGGTATTATTGCCTCTGCCCGTGCTGGTGAAACCCGCTTCACAGACACAAGAAAAGATGAACAAGAAAGA
TGCATCACTATCAAATCCACGTATGCCATCTCCATGTACTACGAGCTCTCTGAAGCTGACTTGGCTTTCATCAAACAGAC
CAAAGATGGCTATGGTTTCCTCATTAACCTGATCGATTCCCCTGGGCACGTCGATTTCTCCTCTGAAGTTACAGCCGCAC
TCCGTGTCACTGATGGTGCCTTGGTGGTCGTGGATTGCGTCTCAGGGGTGTGTGTACAGACGGAGACCGTGCTGCGTCAG
GCGATCGCTGAGCGTATCAAACCTGTACTGATGATGAACAAGATGGACCGGGCTCTTCTGGAGCTGCAGCTTGACCCAGA
GGAACTCTACCAGACCTTCCAGCGTATCGTGGAGAACGTCAACGTCATCATCTCCACCTACGGCGAGGATGAAAATGGAC
CAATGGGAAACATCATGGTTGACCCAATGATCGGTACAGTCGGTTTTGGATCTGGTCTGCACGGCTGGGCCTTCACCCTG
AAGCAGTTTGCTGAGATGTACGTTGCCAAGTTTGCTGCGAAGGGCGATTCCCAGCTCAGTGCTGCTGACCGATGCAAGAA
AGTGGAAGACATGATGAAGAAGCTCTGGGGAGACCGGTACTTTGATCCATCTGCTGGCAAATTCAGCAAATCAGCCACTA
GCCCCGATGGCCGAAAACTTCCTCGGACTTTCTCTCAGCTGATTTTGGACCCGATCTTTAAGATATTTGATGCCATCATG
AACTTCAAGAAGGAAGAGACCGCTAAACTGATTGAGAAACTGGACATTAAGCTGGATAGTGATGATAAGGACAAAGAAGG
CAAACCCCTGCTGAAGGCTGTGATGCGTCGTTGGCTCCCTGCTGGTGAAGCTCTTCTTCAGATGATTGCAATCCATTTGC
CGTCTCCAGTTACAGCGCAGAAATACCGCTGTGAGCTTCTGTATGAAGGCCCGTCTGACGATGATGCTGCTCTGGGTATC
CGGAACTGTGACCCTAAGGGACCTCTGGTAATGTACATCTCTAAAATGGTGCCAACTACCGATAAGGGCCGCTTCTATGC
TTTTGGTCGTGTTTTCTCTGGTGTTGTGTCTACTGGCCTAAAGGTCAGAATTATGGGACCAAACTATACTCCTGGCAAAA
AGGAAGACTTGTACCTCAAACCCATCCAGAGAACTATTTTGATGATGGGCCGTTATGTGGAGCCCATTGAAGATGTGCCT
TGTGGTAACATTGTTGGCCTGGTTGGCGTCGACCAGTTCCTGGTAAAAACTGGCACCATCACCACCTATGAACATGCCCA
CAACCTGAGGGTGATGAAGTTCAGCGTCAGCCCTGTCGTGCGTGTTGCTGTTGAGGCCAAGAACCCAGGTGACCTCCCCA
AACTGGTGGAGGGTCTGAAGCGTCTAGCAAAGTCCGACCCTATGGTTCAGTGTATCATTGAAGAGTCTGGAGAGCACATC
ATTGCTGGTGCTGGGGAGCTGCATCTGGAGATCTGTCTGAAAGATTTGGAGGAAGATCACGCCTGCATCCCTCTCAAGAA
ATCCGATCCTGTTGTGTCGTACCGCGAAACTGTTTCAGAGGAATCGCAGCAACTTTGTTTGTCCAAGTCTCCCAACAAAC
ACAACCGACTGTACATGAAGGCCCGACCCTTCCCAGATGGTCTCGCTGAGGATATTGATAAGGGTGAAGTTGCGGCTCGT
CAAGAGCTGAAACTCCGAGCTCGCTACCTGGCAGAAAAGTATGAGTGGGACGTCACCGAGGCTCGTAAGATCTGGTGCTT
CGGACCAGATGGGACCGGTCCGAATGTCCTGGTTGATGTCACAAAGGGGGTGCAGTACCTGAATGAAATCAAGGATAGCA
TGATCGCTGGCTTCCAGTGGGCAACCAAAGAGGGTGTGCTGTGTGAGGAGAACCTGCGTGCAGTCCGTTTTGATGTCCAT
GATGTCACACTGCACACGGATGCCATCCACAGAGGTGGCGGCCAGATCATTCCGACGGCCAGAAGGTGTCTGTACGCCTG
CCTGCTGACTGCAAGCCCTAGGCTCATGGAGCCAATCTACTTGGTTGAAATTCAGTGTCCAGAGCAGGTGGTTGGTGGAA
TCTATGGTGTGCTGAACAGGAAACGTGGGCATGTCTTTGAGGAGTCCCAGGTCACTGGCACACCCATGTTTGTCGTTAAG
GCCTACTTGCCTGTAAATGAATCTTTTGGTTTCACGGCAGATTTGAGGTCCAATACTGGTGGCCAAGCCTTCCCACAGTG
CGTCTTTGACCACTGGCAGATCCTGCCTGGTGACCCTTTTGATGCCACTTCCCGTCCCTACCAGGTGGTTAGCGAGACCC
GTAAACGCAAGGGCCTGAAAGAAGGCGTTCCGCCACTGGATAACTTCCTGGACAAATTGTAA
ATGAGAAGTGGTGCAGCATGGCAGTTTGTCATAGAAAATAACTGGGTGAACTTCACAGTAAATCAGATCCGTGAGATCAT
GGACAAAAAGTCCAACATCCGTAACATGTCTGTGATCGCTCATGTTGATCACGGCAAATCCACCCTGACTGACTCACTGG
TGAGCAAAGCTGGTATTATTGCCTCTGCCCGTGCTGGTGAAACCCGCTTCACAGACACAAGAAAAGATGAACAAGAAAGA
TGCATCACTATCAAATCCACGTATGCCATCTCCATGTACTACGAGCTCTCTGAAGCTGACTTGGCTTTCATCAAACAGAC
CAAAGATGGCTATGGTTTCCTCATTAACCTGATCGATTCCCCTGGGCACGTCGATTTCTCCTCTGAAGTTACAGCCGCAC
TCCGTGTCACTGATGGTGCCTTGGTGGTCGTGGATTGCGTCTCAGGGGTGTGTGTACAGACGGAGACCGTGCTGCGTCAG
GCGATCGCTGAGCGTATCAAACCTGTACTGATGATGAACAAGATGGACCGGGCTCTTCTGGAGCTGCAGCTTGACCCAGA
GGAACTCTACCAGACCTTCCAGCGTATCGTGGAGAACGTCAACGTCATCATCTCCACCTACGGCGAGGATGAAAATGGAC
CAATGGGAAACATCATGGTTGACCCAATGATCGGTACAGTCGGTTTTGGATCTGGTCTGCACGGCTGGGCCTTCACCCTG
AAGCAGTTTGCTGAGATGTACGTTGCCAAGTTTGCTGCGAAGGGCGATTCCCAGCTCAGTGCTGCTGACCGATGCAAGAA
AGTGGAAGACATGATGAAGAAGCTCTGGGGAGACCGGTACTTTGATCCATCTGCTGGCAAATTCAGCAAATCAGCCACTA
GCCCCGATGGCCGAAAACTTCCTCGGACTTTCTCTCAGCTGATTTTGGACCCGATCTTTAAGATATTTGATGCCATCATG
AACTTCAAGAAGGAAGAGACCGCTAAACTGATTGAGAAACTGGACATTAAGCTGGATAGTGATGATAAGGACAAAGAAGG
CAAACCCCTGCTGAAGGCTGTGATGCGTCGTTGGCTCCCTGCTGGTGAAGCTCTTCTTCAGATGATTGCAATCCATTTGC
CGTCTCCAGTTACAGCGCAGAAATACCGCTGTGAGCTTCTGTATGAAGGCCCGTCTGACGATGATGCTGCTCTGGGTATC
CGGAACTGTGACCCTAAGGGACCTCTGGTAATGTACATCTCTAAAATGGTGCCAACTACCGATAAGGGCCGCTTCTATGC
TTTTGGTCGTGTTTTCTCTGGTGTTGTGTCTACTGGCCTAAAGGTCAGAATTATGGGACCAAACTATACTCCTGGCAAAA
AGGAAGACTTGTACCTCAAACCCATCCAGAGAACTATTTTGATGATGGGCCGTTATGTGGAGCCCATTGAAGATGTGCCT
TGTGGTAACATTGTTGGCCTGGTTGGCGTCGACCAGTTCCTGGTAAAAACTGGCACCATCACCACCTATGAACATGCCCA
CAACCTGAGGGTGATGAAGTTCAGCGTCAGCCCTGTCGTGCGTGTTGCTGTTGAGGCCAAGAACCCAGGTGACCTCCCCA
AACTGGTGGAGGGTCTGAAGCGTCTAGCAAAGTCCGACCCTATGGTTCAGTGTATCATTGAAGAGTCTGGAGAGCACATC
ATTGCTGGTGCTGGGGAGCTGCATCTGGAGATCTGTCTGAAAGATTTGGAGGAAGATCACGCCTGCATCCCTCTCAAGAA
ATCCGATCCTGTTGTGTCGTACCGCGAAACTGTTTCAGAGGAATCGCAGCAACTTTGTTTGTCCAAGTCTCCCAACAAAC
ACAACCGACTGTACATGAAGGCCCGACCCTTCCCAGATGGTCTCGCTGAGGATATTGATAAGGGTGAAGTTGCGGCTCGT
CAAGAGCTGAAACTCCGAGCTCGCTACCTGGCAGAAAAGTATGAGTGGGACGTCACCGAGGCTCGTAAGATCTGGTGCTT
CGGACCAGATGGGACCGGTCCGAATGTCCTGGTTGATGTCACAAAGGGGGTGCAGTACCTGAATGAAATCAAGGATAGCA
TGATCGCTGGCTTCCAGTGGGCAACCAAAGAGGGTGTGCTGTGTGAGGAGAACCTGCGTGCAGTCCGTTTTGATGTCCAT
GATGTCACACTGCACACGGATGCCATCCACAGAGGTGGCGGCCAGATCATTCCGACGGCCAGAAGGTGTCTGTACGCCTG
CCTGCTGACTGCAAGCCCTAGGCTCATGGAGCCAATCTACTTGGTTGAAATTCAGTGTCCAGAGCAGGTGGTTGGTGGAA
TCTATGGTGTGCTGAACAGGAAACGTGGGCATGTCTTTGAGGAGTCCCAGGTCACTGGCACACCCATGTTTGTCGTTAAG
GCCTACTTGCCTGTAAATGAATCTTTTGGTTTCACGGCAGATTTGAGGTCCAATACTGGTGGCCAAGCCTTCCCACAGTG
CGTCTTTGACCACTGGCAGATCCTGCCTGGTGACCCTTTTGATGCCACTTCCCGTCCCTACCAGGTGGTTAGCGAGACCC
GTAAACGCAAGGGCCTGAAAGAAGGCGTTCCGCCACTGGATAACTTCCTGGACAAATTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| DRP000627_pectoral_fin | 1916 .19 RPM |
| DRP000627_kidney | 755 .03 RPM |
| DRP000627_pelvic_fin | 2833 .29 RPM |
| DRP000627_pharynx | 125 .98 RPM |
| DRP000627_gill | 884 .19 RPM |
| DRP000627_tail_muscle | 106 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000004258 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000019158 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022767 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000000750 | ortholog_many2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000034994 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lcha_83 | 81.14 | 93.12 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSLACG00000011124 retrocopies