Parental gene: | PLSCR3, ENSLACG00000011730 |
| Aliases: | None |
| Description: | None |
| Organism: | Coelacanth (Latimeria chalumnae) |
| Coordinates: | JH127792.1:630201..657253(+) |
>ENSLACG00000011730
ATGGCGACACCAGGTTACCCCACTGCACATCCTGGATACCCCGTAGCCCAGCAAGGCAACTACCCTATGCCCCCTTACCC
CATCACACAACCTGGGTACCCCATGCCAGACCCCAACACCCCTGCCCCAACTCCTGGCTTCAATATGTACCCCATGGGAC
CCTCACCTGGCATTGGGAGCCCTCACACCCCTGCCCAGGGCTACAACCCTGACGACTCGAGGACGCCCCTGCGGCACGCT
GGACAGGACCCGCACGGCACGCTAACGCCCTACGTACCCATAGCAACAGGTGTCCCACACGGGCTGGAATACCTGACGCA
GGTTGACCAGATTCTGATCCACCAGACGGTCGAGCTTGTAGAAGCTTTTATCGGGTTTGAAACCAACAACAAGTACGAGA
TCAAGAACAGCCTAGGGCAAAAGATCTACTACGCCAAGGAGGAGAACGATTGTTGCACCAGGAACTGCTGCGGCCCTCTC
CGCCATTTCAACATGAAGATCACAGACAATACCGACCGAGAGGTCATCCACCTCGTCCGGCCCTTCAAATGTGCCAGCTG
CTGGTGCCCCTGTTGTTTGCAGGAGATGGAGGTGCAGTCTCCTCCGGGAACCACAATCGGCTTCATCATTCAGAACTGGC
ACCCGTTCATCCCCAAGTTCTCCATTCAGAACGTCGAGAGAGAGACTGTGTTGAAAGTGACCGGTTCCTGCTGTATGTGT
AACTGTTGCGGGGACGTGGTGTTTGACGTGAAAACCCGGGACGAGTCGCGCAGCGTGGGGCGGATCAGTAAGCAGTGGAG
CGGCCTACTGAAGGAGGTTTTTACCGACACGGATAACTTCGGAATCCAGTTCCCCATGGACCTCGACGTCAAAATGAAAG
CCACGCTGATGGGAGCTTGCTTCCTCATAGTAAGTATGGGCTGA
ATGGCGACACCAGGTTACCCCACTGCACATCCTGGATACCCCGTAGCCCAGCAAGGCAACTACCCTATGCCCCCTTACCC
CATCACACAACCTGGGTACCCCATGCCAGACCCCAACACCCCTGCCCCAACTCCTGGCTTCAATATGTACCCCATGGGAC
CCTCACCTGGCATTGGGAGCCCTCACACCCCTGCCCAGGGCTACAACCCTGACGACTCGAGGACGCCCCTGCGGCACGCT
GGACAGGACCCGCACGGCACGCTAACGCCCTACGTACCCATAGCAACAGGTGTCCCACACGGGCTGGAATACCTGACGCA
GGTTGACCAGATTCTGATCCACCAGACGGTCGAGCTTGTAGAAGCTTTTATCGGGTTTGAAACCAACAACAAGTACGAGA
TCAAGAACAGCCTAGGGCAAAAGATCTACTACGCCAAGGAGGAGAACGATTGTTGCACCAGGAACTGCTGCGGCCCTCTC
CGCCATTTCAACATGAAGATCACAGACAATACCGACCGAGAGGTCATCCACCTCGTCCGGCCCTTCAAATGTGCCAGCTG
CTGGTGCCCCTGTTGTTTGCAGGAGATGGAGGTGCAGTCTCCTCCGGGAACCACAATCGGCTTCATCATTCAGAACTGGC
ACCCGTTCATCCCCAAGTTCTCCATTCAGAACGTCGAGAGAGAGACTGTGTTGAAAGTGACCGGTTCCTGCTGTATGTGT
AACTGTTGCGGGGACGTGGTGTTTGACGTGAAAACCCGGGACGAGTCGCGCAGCGTGGGGCGGATCAGTAAGCAGTGGAG
CGGCCTACTGAAGGAGGTTTTTACCGACACGGATAACTTCGGAATCCAGTTCCCCATGGACCTCGACGTCAAAATGAAAG
CCACGCTGATGGGAGCTTGCTTCCTCATAGTAAGTATGGGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| DRP000627_pectoral_fin | 1 .26 RPM |
| DRP000627_kidney | 0 .95 RPM |
| DRP000627_pelvic_fin | 5 .39 RPM |
| DRP000627_pharynx | 0 .31 RPM |
| DRP000627_gill | 1 .07 RPM |
| DRP000627_tail_muscle | 0 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Mus musculus | ENSMUSG00000019461 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lcha_14 | 59.17 | 79.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSLACG00000011730 retrocopies