Parental gene: | plin2 (7 of 7), ENSLACG00000017943 |
| Aliases: | None |
| Description: | perilipin 2 [Source:ZFIN;Acc:ZDB-GENE-050913-12] |
| Organism: | Coelacanth (Latimeria chalumnae) |
| Coordinates: | JH126657.1:2530644..2540580(-) |
>ENSLACG00000017943
ATGGCATCTGTTGGCGCAGATACTCCACAGAATGTGGTTGTCCGAGTTGCAAATCTTCCTCTGGTTAGTTCCACTTATGA
TATGGTGTCCTCTGTTTATGTTAATACAAAAGAGAATCATCCTTACCTGAGATCAGTCTGTGAGGTGGCAGAAAAAGGTG
TGAAGACTATCACAGCAGCTGCTTTTACTAATGCTATACCGTTCATCCAGAAAATGGAGCCACAAATTGTGTTTGTCAAT
AACTATGCAAGCATAGTTCTGGACAAGGTTGAAGAGAAACTGCCCATTTTACGTCAGCCCTCTGACAAGGTGGCGACAAA
TGCTAAGGGACTGGTGATGGGTGCAAAGGAGGTGGTCCACACAATCTCTGGGGTGGTAGACAAGACAAAAGAAGCTGTGC
ATGAAAGTATGGAGACAGCCAAGTCTATTGTGAATGGTGGTGTCAACACTGTTTTTGGAAACCATGTGGTTCAGATTATA
AGCAGTGGTGTGGATGCTGCACTGACCAAGTCTGAACTATTTGTGGATCACTATCTTCCCTTGACAGAAGATGAACTGGC
AAAAGAATCTGCAGAGGCTGAAGGATATGAAAGTGGAACTCCAAACTACTACATGAGACTGAGGTCCTTGTTGTTCAAAG
TGTGTAAATATGCCTATTGGCAGGCCTTGTCTAGAATTAGAGATGCCAAACAAATAAGCCAAGAGATCTTTACTCAGATC
TATTATATTAGTGACTTGATGGAGTATCTTAGGAAGAGCATGGATAAAGTAAACCAGAAACTTCATGATGTCCAGGAA
ATGGCATCTGTTGGCGCAGATACTCCACAGAATGTGGTTGTCCGAGTTGCAAATCTTCCTCTGGTTAGTTCCACTTATGA
TATGGTGTCCTCTGTTTATGTTAATACAAAAGAGAATCATCCTTACCTGAGATCAGTCTGTGAGGTGGCAGAAAAAGGTG
TGAAGACTATCACAGCAGCTGCTTTTACTAATGCTATACCGTTCATCCAGAAAATGGAGCCACAAATTGTGTTTGTCAAT
AACTATGCAAGCATAGTTCTGGACAAGGTTGAAGAGAAACTGCCCATTTTACGTCAGCCCTCTGACAAGGTGGCGACAAA
TGCTAAGGGACTGGTGATGGGTGCAAAGGAGGTGGTCCACACAATCTCTGGGGTGGTAGACAAGACAAAAGAAGCTGTGC
ATGAAAGTATGGAGACAGCCAAGTCTATTGTGAATGGTGGTGTCAACACTGTTTTTGGAAACCATGTGGTTCAGATTATA
AGCAGTGGTGTGGATGCTGCACTGACCAAGTCTGAACTATTTGTGGATCACTATCTTCCCTTGACAGAAGATGAACTGGC
AAAAGAATCTGCAGAGGCTGAAGGATATGAAAGTGGAACTCCAAACTACTACATGAGACTGAGGTCCTTGTTGTTCAAAG
TGTGTAAATATGCCTATTGGCAGGCCTTGTCTAGAATTAGAGATGCCAAACAAATAAGCCAAGAGATCTTTACTCAGATC
TATTATATTAGTGACTTGATGGAGTATCTTAGGAAGAGCATGGATAAAGTAAACCAGAAACTTCATGATGTCCAGGAA
| Library | Parental gene expression (RPM) |
|---|---|
| DRP000627_pectoral_fin | 0 .02 RPM |
| DRP000627_kidney | 0 .00 RPM |
| DRP000627_pelvic_fin | 0 .00 RPM |
| DRP000627_pharynx | 0 .00 RPM |
| DRP000627_gill | 0 .00 RPM |
| DRP000627_tail_muscle | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000002827 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000008088 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lcha_61 | 81.67 | 89.85 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSLACG00000017943 retrocopies