Parental gene:

SNRPC, ENSLAFG00000013534

Aliases:None
Description:U1 small nuclear ribonucleoprotein C [Source:UniProtKB/TrEMBL;Acc:G3TBG7]
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_105:1114462..1125241(-)


>ENSLAFG00000013534
ATGCCTAAGTTTTATTGTGACTACTGCGATACATACCTCACCCATGACTCTCCATCTGTGAGAAAGACACACTGCAGTGG
TAGGAAACACAAGGAGAATGTGAAAGACTACTATCAGAAATGGATGGAAGAGCAGGCTCAGAGCCTGATTGACAAAACAA
CGGCTGCATTTCAACAAGGAAAGATACCTCCTACTCCATTCTCTGCTCCTCCTCCAGCAGGGGCGATGATCCCGCCTCCC
CCCAGTCTCCCGGGTCCTCCCCGCCCTGGGATGATGCCAGCACCCCATATGGGGGGCCCTCCCATGATGCCAATGATGGG
CCCTCCTCCTCCTGGGATGATGCCGGTGGGACCTGCTCCTGGAATGAGGCCACCCATGGGAGGCCACATGCCAATGATGC
CTGGGCCCCCAATGATGAGGCCCCCTGCCCGTCCCATGATGGTGCCCACCCGGCCAGGAATGACTCGACCAGACAGATAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000024549 ortholog_one2one 1 retrogene
Canis familiaris ENSCAFG00000001231 possible_ortholog 3 retrogenes
Callithrix jacchus ENSCJAG00000015321 possible_ortholog 16 retrogenes
Homo sapiens ENSG00000124562 ortholog_one2one 6 retrogenes
Monodelphis domestica ENSMODG00000013904 ortholog_one2one 1 retrogene
Nomascus leucogenys ENSNLEG00000008392 possible_ortholog 2 retrogenes
Oryctolagus cuniculus ENSOCUG00000026668 ortholog_one2one 3 retrogenes
Otolemur garnettii ENSOGAG00000008755 possible_ortholog 9 retrogenes
Pongo abelii ENSPPYG00000017272 possible_ortholog 4 retrogenes
Sarcophilus harrisii ENSSHAG00000000945 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_621 73.79 63.52
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2. retro_lafr_878 71.17 100.00
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Download FASTA sequences of all ENSLAFG00000013534 retrocopies