Parental gene:

FXN, ENSMMUG00000000357

Aliases:None
Description:frataxin, mitochondrial [Source:RefSeq peptide;Acc:NP_001247670]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:15:77834884..77873876(+)


>ENSMMUG00000000357
ATGTGGACTTTCGGACGCCGCGCAGTTGCCGGCCTCCTGGCGTCCCCGAGCCCGGCCCAGGCCCAGACCCTCACCCGGGC
CCCGCGGCTGGCAGAGTTGGCCCAGCTCTGCAGCCGCCGGGGCCTGCGCACCGGCATCAATGCGACCTGCACAACCCACC
ACACCAGTTCGAACCTCCGTGGCCTCAACCAGATTCGGAATGTCAAAAGGCAGAGTGTCTACTTGATGAATTTGAGGAAA
TCGGGAACTTTGGGCCACCCAGGCTCTCTAGATGATACCACCTATGAAAGACTAGCAGAGGAAACGCTGGACTCTTTAGC
AGAGTTTTTTGAAGACCTTGCAGACAAGCCATACACCTTTGAGGACTATGATGTTTCCTTTGGGAGTGGTGTCTTAACTG
TTAAACTGGGTGGAGATCTAGGAACCTACGTGATCAACAAGCAGACGCCAAACAAGCAAATCTGGTTATCTTCTCCATCC
AGTGGACCCAAGCGTTATGACTGGACTGGGAAAAACTGGGTGTATTCCCACGACGGCGTTTCCCTCCATGAGCTGCTGGG
CGCAGAGCTCACTAAAGCCTTAAAAACCAAACTGGACTTGTCTTCCTTGGCCTATTCCGGAAAAGACGCTTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 2 .62 RPM
SRP007412_brain 4 .48 RPM
SRP007412_cerebellum 4 .00 RPM
SRP007412_heart 9 .83 RPM
SRP007412_kidney 7 .28 RPM
SRP007412_liver 4 .79 RPM
SRP007412_testis 3 .58 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006915 ortholog_one2many 1 retrogene
retro_amel_1496,
Choloepus hoffmanni ENSCHOG00000005107 ortholog_one2many 2 retrogenes
retro_chof_349, retro_chof_94,
Callithrix jacchus ENSCJAG00000001695 ortholog_one2many 4 retrogenes
retro_cjac_1562, retro_cjac_1927, retro_cjac_3939, retro_cjac_813,
Dasypus novemcinctus ENSDNOG00000024066 ortholog_one2many 3 retrogenes
retro_dnov_2204, retro_dnov_2317, retro_dnov_307,
Equus caballus ENSECAG00000019174 ortholog_one2many 1 retrogene
retro_ecab_311,
Homo sapiens ENSG00000165060 ortholog_one2many 2 retrogenes
retro_hsap_1447, retro_hsap_4311,
Gorilla gorilla ENSGGOG00000007636 ortholog_one2many 3 retrogenes
retro_ggor_1112, retro_ggor_2203, retro_ggor_2881,
Mustela putorius furo ENSMPUG00000009619 ortholog_one2many 2 retrogenes
retro_mputfur_501, retro_mputfur_803,
Mus musculus ENSMUSG00000059363 ortholog_one2many 2 retrogenes
retro_mmus_1571, retro_mmus_3058,
Otolemur garnettii ENSOGAG00000031105 ortholog_many2many 2 retrogenes
retro_ogar_1865, retro_ogar_476,
Rattus norvegicus ENSRNOG00000015213 ortholog_one2many 1 retrogene
retro_rnor_2276,
Tursiops truncatus ENSTTRG00000010336 ortholog_one2many 4 retrogenes
retro_ttru_1281, retro_ttru_175, retro_ttru_546, retro_ttru_831,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_826 85.00 76.19
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2. retro_mmul_2038 55.46 54.29
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Download FASTA sequences of all ENSMMUG00000000357 retrocopies