Parental gene:

MMU.4101, ENSMMUG00000001856

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:10:85580185..85617244(+)


>ENSMMUG00000001856
ATGTCAGGGTGGGAGTCATATTACAAAACCGAGGGCGATGAAGAAGCAGAAGAAGAACAAGAAGAGAACCTTGAAGCAAG
TGGTAAACCCTTCTCATCCAGGAAAGTAGTTTTACCATTCCAGGACCTCAGTGTAAAAATGCCCCCACCCTACAATAACT
ACCCCAACCAAAGAATAAATGCAAGCAACACATGTATCCAAAGTGTGTACATCAGTAAGATCATAAGCAGTGATCGAGAT
CTCCTGGCTGTGGTGTTCTATGGTACCGAGAAAGACAAAAATTCAGTGAACTTTAAAAATATTTACGTCTTACAGGAGCT
GGATAATCCGGGTGCAAAACGAATTCTGGAGCTTGACCAGTTTAAGGGGCAGCAAGGACAAAAACGTTTCCAAGACCTAA
TGGGCCATGGATCTGACTACTCACTCAGTGAGGTGCTGTGGGTCTGTGCCAACCTCTTCAGTGATGTCCAATTCAAGATG
AGTCATAAGAGGATCATGCTGTTCACCAATGAAGACAACCCCCATGGCAATGACAGTGCCAAAGCCAGCCGGGCCAGGAC
CAAAGCAGGTGATCTCCGAGATACAGGCATCTTCCTTGACTTGATGCACCTGAAGAAACCTGGGGGCTTTGACATATCCT
TGTTCTACAGAGATATCATCAGCATAGCAGAGGATGAGGACCTCAGGGTTCACTTTGAGGAATCCAGCAAGCTAGAAGAC
CTGTTGCGGAAGGTTCGCGCCAAGGAGACCAGGAAGCGAGCACTCAGCAGGTTAAAGCTGAAGCTCAACAAAGATATAGT
GATCTCTGTGGGCGTTTATAATCTGGTCCAGAAGGCTCTCAAGCCTCCTCCAATAAAGCTCTATCGGGAAACAAATGAAC
CAGTGAAAACCAAGACCCGGACCTTTAATACGAGTACAGGTGGTTTGCTTCTGCCTAGCGATACCAAGAGGTCTCAGATC
TATGGGAGTCGTCAGATTATACTGGAGAAAGAGGAGACAGAAGAGCTAAAACGATTTGATGATCCAGGTTTGATGCTCAT
GGGTTTCAAGCCGTTGGTACTGCTGAAGAAACACCATTACCTGAGGCCCTCCCTGTTCGTGTACCCAGAGGAGTCGTTGG
TGATTGGTAACTCAACCTTGTTCAGTGCTCTGCTCATCAAGTGTCTGGAGAAGGAGGTTGCAGCATTGTGCAGATACACA
CCCCGCAGGAACATCCCCCCTTATTTTGTGGCTTTGGTGCCACAGGACGAAGAGTTGGATGACCAGAAAATTCAGGTGAC
TCCTCCAGGCTTCCAGCTGGTCTTTTTACCCTTTGCTGATGATAAAAGGAAGATGCCCTTTACTGAAAAAATCATGGCAA
CTCCAGAGCAGGTGGACAAGATGAAGGCTATCGTTGAGAAGCTTCGCTTCACATACAGAAGTGACAGCTTTGAGAACCCC
GTGCTGCAGCAGCACTTCAGGAACCTGGAGGCCTTGGCTTTGGATTTGATGGAGCCGGAACAAGCAGTGGACCTGACATT
GCCCAAGGTTGAAGCAATGAATAAAAGACTGGGCTCCTTGGTGGATGAGTTTAAGGAGCTTGTTTACCCACCAGATTACA
ATCCTGAAGGGAAAGTTACCAAGAGAAAACACGATAATGATGGTTCTGGAAGCAAAAGGCCCAAGGTGGAGTATTCAGAA
GAGGAGCTGAAGACCCACATCAGCAAGGGCACGCTGGGCAAGTTCACTGTGCCCATGCTGAAAGAGGCCTGCCGGGCTTA
CGGGCTGAAGAGTGGGCTGAAGAAGCAGGAGCTGCTGGAAGCCCTCACCAAGCACTTCCAGGACTGA

Library Parental gene expression (RPM)
SRP007412_brain 179 .50 RPM
SRP007412_brain_prefrontal_cortex 156 .91 RPM
SRP007412_cerebellum 173 .32 RPM
SRP007412_heart 126 .37 RPM
SRP007412_kidney 164 .55 RPM
SRP007412_liver 112 .73 RPM
SRP007412_testis 388 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000196419 ortholog_one2one 4 retrogenes
retro_hsap_4066, retro_hsap_4880, retro_hsap_4913, retro_hsap_511,
Gorilla gorilla ENSGGOG00000015885 ortholog_one2one 2 retrogenes
retro_ggor_3067, retro_ggor_471,
Nomascus leucogenys ENSNLEG00000015610 ortholog_one2one 3 retrogenes
retro_nleu_1552, retro_nleu_2287, retro_nleu_2676,
Pongo abelii ENSPPYG00000011876 ortholog_one2one 1 retrogene
retro_pabe_3821,
Tupaia belangeri ENSTBEG00000011736 ortholog_one2many 3 retrogenes
retro_tbel_1474, retro_tbel_1523, retro_tbel_3859,
Tursiops truncatus ENSTTRG00000006749 ortholog_one2many 1 retrogene
retro_ttru_289,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_430 80.70 56.35
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2. retro_mmul_2346 79.88 60.64
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Download FASTA sequences of all ENSMMUG00000001856 retrocopies