Parental gene:

XRCC6, ENSPPYG00000011876

Aliases:None
Description:X-ray repair complementing defective repair in Chinese hamster cells 6 [Source:HGNC Symbol;Acc:4055]
Organism:Orangutan (Pongo abelii)
Coordinates:22:36887611..36931893(+)


>ENSPPYG00000011876
ATGTCAGGGTGGGAGTCATATTACAAAACCGAGGGCGATGAAGAAGCAGAAGAAGAACAAGAAGAGAACCTTGAAGCAAG
TGGAGACTATAAATATTCGGGAAGAGATAGTTTGATTTTTTTGGTTGATGCCTCCAAGGCTATGTTTGAATCTCAGAGTG
AAAATGAGTTGACACCTTTTGACATGAGCATCCAGTGTATCCAAAGTGTGTACATCAGTAAAATCATAAGCAGTGATCGA
GATCTCTTGGCTGTGGTGTTCTATGGTACTGAGAAAGACAAAAATTCAGTGAATTTTAAAAATATTTACGTCTTACAGGA
GCTGGATAATCCAGGTGCAAAACGAATTCTAGAGCTTGACCAGTTTAAGGGACAGCAGGGACAAAAACGTTTCCAAGAGC
TGATGGGCCACGGATCTGACTACTCACTCAGTGAAGTGCTGTGGGTCTGTGCCAACCTCTTTAGTGATGTCCAATTCAAG
ATGAGTCATAAGAGGATCATGCTGTTCACCAATGAAGACAACCCCCATGGCAATGACAGTGCCAAAGCCAGCCGGGCCAG
GACCAAAGCCGGTGATCTCCGAGATACAGGCATCTTCCTTGACTTGATGCACCTGAAGAAACCTGGGGGCTTTGACATAT
CCTTGTTCTACAGAGATATCATCAGCATAGCAGAGGATGAGGACCTCAGGGTTCACTTTGAGGAATCTAGCAAGCTAGAA
GACCTGTTGCGGAAGGTTCGCGCCAAGGAGACCAGGAAGCGAGCACTCAGCAGGTTAAAGCTGAAGCTCAACAAAGATAT
AGTGATCTCTGTGGGCATTTATAATCTGGTCCAGAAGGCTCTCAAGCCTCCTCCAATAAAGCTCTATCGGGAAACAAATG
AACCAGTGAAAACCAAGACCCGGACCTTTAATACAAGTACAGGCGGTTTGCTTCTGCCTAGCGATACCAAGAGGTCTCAG
ATCTATGGGAGTCGTCAGATTATACTGGAGAAAGAGGAAACAGAAGAGCTAAAACGGTTTGATGATCCAGGTTTGATGCT
CATGGGTTTCAAGCCATTGGTACTGCTGAAGAAACACCATTACCTGAGGCCCTCCCTGTTCGTGTACCCAGAGGAGTCGC
TGGTGATTGGCTTCCAGCTGGTCTTTTTACCCTTTGCTGATGATAAAAGGAAGATGCCCTTTACTGAAAAAATCATGGCA
ACTCCAGAGCAGGTGGACAAGATGAAGGCTATCGTTGAGAAGCTTCGCTTCACATACAGAAGTGACAGCTTTGAGAACCC
CGTGCTGCAGCAGCACTTCAGGAACCTGGAGGCCTTGGCCTTGGATTTGATGGAGCCAGAACAAGCAGTGGACCTGACAT
TGCCCAAGGTTGAAGCAATGAATAAAAGACTGGGCTCCTTGGTGGATGAGTTTAAGGAGCTTGTTTACCCACCAGATTAC
AATCCTGAAGGGAAAGTTACCAAGAGAAAACACGATAATGAAGGTTCTGGAAGCAAAAGGCCCAAGGTGGAGTATTCAGA
AGAGGAGCTGAAGACCCACATCAGCAAGGGCACACTGGGCAAGTTCACTGTGCCCATGCTGAAAGAGGCCTGCCGGGCTT
ATGGGCTGAAGAGTGGGCTGAAGAAGCAGGAGCTGCTGGAAGCCCTCACCAAGCACTTCCAGGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 131 .76 RPM
SRP007412_cerebellum 110 .17 RPM
SRP007412_heart 63 .43 RPM
SRP007412_kidney 91 .58 RPM
SRP007412_liver 100 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000196419 ortholog_one2one 4 retrogenes
retro_hsap_4066, retro_hsap_4880, retro_hsap_4913, retro_hsap_511,
Gorilla gorilla ENSGGOG00000015885 ortholog_one2one 2 retrogenes
retro_ggor_3067, retro_ggor_471,
Macaca mulatta ENSMMUG00000001856 ortholog_one2one 2 retrogenes
retro_mmul_2346, retro_mmul_430,
Nomascus leucogenys ENSNLEG00000015610 ortholog_one2one 3 retrogenes
retro_nleu_1552, retro_nleu_2287, retro_nleu_2676,
Tupaia belangeri ENSTBEG00000011736 ortholog_one2one 3 retrogenes
retro_tbel_1474, retro_tbel_1523, retro_tbel_3859,
Tursiops truncatus ENSTTRG00000006749 ortholog_one2one 1 retrogene
retro_ttru_289,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3821 91.90 64.50
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Download FASTA sequences of all ENSPPYG00000011876 retrocopies