Parental gene:

MMU.2537, ENSMMUG00000006636

Aliases:None
Description:NADH dehydrogenase [Source:RefSeq peptide;Acc:NP_001252695]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:9:100127915..100134384(-)


>ENSMMUG00000006636
ATGGCGGTGGCCAGGGCCGGGGTCCTGGGAGTTCAGTGGCTGCAAAGGGCATCCCGGAACGTGGTGCCGCTGGGCGCACG
GACAGCCTCCCGCATGACCAAGGACATGTTGCCAGGGCCCTATCCTAGGACCCCAGAAGAACGGGCCGCCGCCGCCAAGA
AGTATAATATGCGTGTGGAAGACTACGAGCCTTACCCGGATGAGGGCATGGGGTATGGCGACTACCCGAAGCTCCCTGAC
CGTTCACAGCATGAGAGGGATCCATGGTATAGCTGGGACCAACCGGACCTGAGGTTGAACTGGGGTGAACCGATGCACTG
GCACATAGACATGTACACCAGGAACCGTGTGGATACATCCCCCACACCTGTTTCTTGGAATGTCATGTGTATGCACCTCT
TCGGTTTCCTGGCTTTCATGACATTCATGTTCTGGGTGGGGGACGTGTACCCTTCCTACCAGCCTGTGGGACCAAAGCAG
TATCCTTACAATAATCTGTACCTGGAACGAGGCGGCGATCCCTCCAAAGAACCTGAGCTGGTGGTTCACTATGAGATCTG
A

Library Parental gene expression (RPM)
SRP007412_brain 20 .51 RPM
SRP007412_brain_prefrontal_cortex 101 .70 RPM
SRP007412_cerebellum 21 .31 RPM
SRP007412_heart 36 .45 RPM
SRP007412_kidney 38 .61 RPM
SRP007412_liver 38 .28 RPM
SRP007412_testis 23 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006651 ortholog_one2one 3 retrogenes
Bos taurus ENSBTAG00000000091 ortholog_one2many 1 retrogene
Canis familiaris ENSCAFG00000009698 ortholog_one2one 2 retrogenes
Callithrix jacchus ENSCJAG00000037906 ortholog_one2many 1 retrogene
Dasypus novemcinctus ENSDNOG00000003661 ortholog_one2one 1 retrogene
Felis catus ENSFCAG00000006453 ortholog_one2one 2 retrogenes
Homo sapiens ENSG00000166136 ortholog_one2many 3 retrogenes
Gorilla gorilla ENSGGOG00000027239 ortholog_one2one 3 retrogenes
Microcebus murinus ENSMICG00000001341 ortholog_one2one 1 retrogene
Myotis lucifugus ENSMLUG00000015094 ortholog_one2one 1 retrogene
Monodelphis domestica ENSMODG00000019356 ortholog_one2one 1 retrogene
Mustela putorius furo ENSMPUG00000016959 ortholog_one2one 1 retrogene
Mus musculus ENSMUSG00000025204 ortholog_one2many 2 retrogenes
Nomascus leucogenys ENSNLEG00000014774 ortholog_one2one 3 retrogenes
Otolemur garnettii ENSOGAG00000030711 ortholog_one2many 3 retrogenes
Pongo abelii ENSPPYG00000002570 ortholog_one2one 3 retrogenes
Pan troglodytes ENSPTRG00000002851 ortholog_one2one 3 retrogenes
Sus scrofa ENSSSCG00000006166 ortholog_one2one 2 retrogenes
Tupaia belangeri ENSTBEG00000000209 ortholog_one2one 8 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_415 96.24 100.00
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2. retro_mmul_753 98.11 61.63
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3. retro_mmul_1098 65.41 98.92
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4. retro_mmul_1232 83.33 100.00
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5. retro_mmul_1620 89.78 100.00
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Download FASTA sequences of all ENSMMUG00000006636 retrocopies