Parental gene:

ABCF2, ENSMMUG00000006679

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:3:188155955..188175542(-)


>ENSMMUG00000006679
ATGCCCTCCGACCTGGCCAAGAAGAAGGCAGCCAAAAAGAAGGAGGCTGCCAAAGCTCGACAGCGGCCCAGAAAAGGACA
TGAAGAAAATGGAGATGCTGTCACAGAACCACAGGTGGCAGAGGAGAAGAATGAGGCCAATGGCAGAGAGACCACAGAAA
TAGATTTGCTGACCAAGGAGCTAGAGGACTTTGAGATGAAGAAAGCTGCTGCTCGAGCTGTCACTGGCGTCCTGGCCTCT
CACCCCAACAGTACAGATGTTCACATTATCAACCTCTCACTCACCTTTCATGGTCAAGAGCTGCTCAGTGACACCAAACT
GGAATTAAACTCAGGCCGTCGTTATGGCCTCATTGGTTTAAATGGAATTGGAAAGTCCATGCTGCTCTCCGCTATTGGGA
AACGTGAAGTGCCCATCCCTGAGCACATTGACATCTACCATCTGACTCGAGAGATGCCTCCTAGTGACAAGACACCCTTG
CAGTGTGTGATGGAAGTTGACACAGAGCGGGCCATGCTGGAGAGGGAGGCAGAGCGGCTGGCTCATGAGGATGCGGAGTG
TGAGAAACTCATGGAGCTCTACGAGCGCCTGGAGGAGCTGGATGCTGACAAGGCAGAGATGAGGGCCTCGCGGATCTTAC
ATGGACTGGGATTCACGCCTGCCATGCAGCGCAAGAAGCTAAAAGACTTCAGTGGGGGCTGGAGGATGAGGGTTGCCCTT
GCCAGAGCCCTCTTTATTCGGCCCTTCATGCTGCTCCTGGATGAGCCCACCAACCACCTGGACCTAGATGCTTGTGTGTG
GTTGGAAGAAGAACTAAAAACTTTTAAGCGCATCTTGGTCCTCGTCTCCCATTCCCAGGATTTTCTGAATGGTGTCTGTA
CCAACATCATTCACATGCACAACAAGAAACTGAAGTATTACACGGTGAGTGGGCCTCGGCTTCTTTCTGAATCCAGGATT
GAAACCCAGGTTAAAGCTGCCCGCCTTACCTGGCACATTTCCACGCAGGGTAATTATGATCAGTATGTGAAGACGGCTAG
AGCTGGAGGAGAACCAGATGAAGAGGCCCAGAGCAAGGAGAAGACGCTACAGAAAATGATGGCATCAGGACTGACAGAGA
GGGTCGTGAGCGATAAGACACTGTCATTTTATTTCCCACCATGTGGCAAGATCCCTCCACCTGTCATTATGGTGCAAAAT
GTGAGCTTCAAGTATACAAAAGATGGGCCTTGCATCTACAATAATCTAGAATTTGGAATTGACCTTGACACACGAGTGGC
TCTGGTAGGGCCCAATGGAGCAGGGAAGTCAACTCTTCTGAAGCTGCTAACTGGAGAGTTACTACCCACAGATGGCATGA
TCCGAAAACACTCTCATGTCAAGATAGGGCGTTACCATCAGCATTTACAAGAGCAGCTGGACTTAGATCTCTCGCCTTTG
GAGTACATGATGAAGTGCTACCCAGAGATCAAGGAGAAGGAAGAAATGAGGAAGATCATTGGGCGATACGGTCTTACTGG
GAAACAACAGGTGAGCCCAATCCGGAACTTGTCAGATGGGCAGAAGTGCCGAGTTTGTCTGGCCTGGCTGGCCTGGCAGA
ACCCCCACATGCTCTTCCTGGACGAACCCACCAATCACCTGGATATCGAGACCATCGACGCCCTGGCAGATGCCATCAAT
GAGTTTGAGGGTGGTATGATGCTGGTCAGCCATGACTTCAGACTCATTCAGCAGGTTGCACAGGAAATTTGGGTCTGTGA
GAAGCAGACAATCACCAAGTGGCCTGGAGACATCCTGGCTTACAAGGAGCACCTCAAGTCCAAGCTGGTGGATGAGGAGC
CCCAGCTCACCAAGAGGACCCACAACGTGTGCACCCTGACATCGGCATCTCTGCCAAGGCCATGA

Library Parental gene expression (RPM)
SRP007412_brain 48 .97 RPM
SRP007412_brain_prefrontal_cortex 45 .61 RPM
SRP007412_cerebellum 32 .80 RPM
SRP007412_heart 25 .26 RPM
SRP007412_kidney 22 .53 RPM
SRP007412_liver 10 .01 RPM
SRP007412_testis 61 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000004830 ortholog_one2one 1 retrogene
retro_cfam_1612,
Callithrix jacchus ENSCJAG00000020371 ortholog_one2one 3 retrogenes
retro_cjac_1859, retro_cjac_3526, retro_cjac_381,
Dipodomys ordii ENSDORG00000012672 ortholog_one2one 1 retrogene
retro_dord_334,
Echinops telfairi ENSETEG00000008032 ortholog_one2one 2 retrogenes
retro_etel_1041, retro_etel_1058,
Oryctolagus cuniculus ENSOCUG00000000245 ortholog_one2one 1 retrogene
retro_ocun_765,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1414 76.99 72.39
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Download FASTA sequences of all ENSMMUG00000006679 retrocopies