Parental gene: | SHMT1, ENSMMUG00000013535 |
| Aliases: | None |
| Description: | serine hydroxymethyltransferase, cytosolic [Source:RefSeq peptide;Acc:NP_001244360] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 16:18250167..18287908(-) |
>ENSMMUG00000013535
ATGGAGACGCCAGTCAATGGGGCCCACAAGGATGCTGACCTGTGGTCCTCACATGACAAGATGCTGGCACAGCCCCTGAA
AGACAGTGATGTTGAGGTTTACAACATCATTAAGAAGGAGAGTAACCGGCAGCGGGTTGGATTGGAGCTGATTGCCTCGG
AGAATTTCGCCAGCCGAGCAGTTTTGGAGGCCCTAGGCTCTTGCTTAAATAACAAATACTCTGAGGGGTACCCGGGCCAG
AGATACTATGGCGGGACTGAGTTTATTGATGAACTGGAGACCCTCTGTCAGAAGCGAGCCCTGCAGGCCTATAAGCTGGA
CCCACAGTGCTGGGGGGTCAACGTCCAGCCCTACTCAGGCTCCCCTGCAAACTTCGCTGTGTACACTGCCCTGGTGGAAC
CCCATGGGCGCATCATGGGCCTGGACCTGCCAGATGGGGGCCACCTGACCCATGGGTTCATGACAGACAAGAAGAAAATC
TCTGCCACGTCCATCTTCTTTGAATCTATGCCCTATAAGGTGAACCCAGACACTGGCTACATCAACTATGACCAGCTGGA
GGAGAACGCACGCCTCTTCCACCCGAAGTTGATCATCGCAGGAACCAGCTGCTACTCCCGAAACCTGGACTATGCCCGGC
TGCGGAAGATTGCAGATGAGAACGGGGCGTATCTCATGGCGGACATGGCACACATCAGTGGGCTGGTGGTGGCTGGCGTG
GTGCCCTCCCCATTTGAACACTGCCACGTGGTGACCACCACCACTCACAAGACCCTGCGAGGCTGCCGAGCTGGCATGAT
CTTCTACAGGAAAGGAGTGAAAAATGTGGATCCCAAGACTGGCAAAGAGATTCTGTACAACCTGGAGTCTCTTATCAATT
CTGCTGTGTTCCCTGGCCTGCAGGGAGGTCCCCACAACCACGCCATTGCTGGGGTTGCTGTGGCCCTGAAGCAAGCTATG
ACTCTGGAATTTAAAGTTTATCAGCACCAGGTGGTGGCCAACTGCAGGGCTCTGTCTGAGGCACTGATGGAGCTGGGCTA
CAAAATAGTCACAGGTGGTTCTGACAACCATTTGATCCTCGTGGATCTCCGTTCCAAAGGCACAGACGGTGGAAGGGCTG
AGAAGGTGCTAGAAGCCTGTTCTATTGCCTGCAACAAGAACACCTGCCCAGGTGACAGAAGTGCTCTGCGGCCCAGTGGA
CTGCGGCTGGGGACCCCAGCACTGACGTCTCGTGGACTTTTGGAAAAAGACTTCCAAAAAGTAGCCCAGTTTATTCACAG
AGGGATAGAGCTGACCCTGCAGATCCAGAGCGACATTGGTGTCAGAGCCACCCTGAAGGAGTTCAAGGAGAGACTGGCAG
GGGATAAGTACCAGGGGGCCGTGCAGGCTCTCCGGGAGGAGGTTGAGAGCTTCGCCTCTCTCTTCCCTCTGCCTGGCCTG
CCCGACTTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 2 .69 RPM |
| SRP007412_brain_prefrontal_cortex | 4 .44 RPM |
| SRP007412_cerebellum | 3 .75 RPM |
| SRP007412_heart | 2 .18 RPM |
| SRP007412_kidney | 138 .38 RPM |
| SRP007412_liver | 396 .47 RPM |
| SRP007412_testis | 12 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Pongo abelii | ENSPPYG00000008051 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_487 | 85.39 | 71.43 | Please wait, loading  |
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Download FASTA sequences of all ENSMMUG00000013535 retrocopies