Parental gene:

SHMT1, ENSPPYG00000008051

Aliases:None
Description:serine hydroxymethyltransferase, cytosolic [Source:RefSeq peptide;Acc:NP_001124622]
Organism:Orangutan (Pongo abelii)
Coordinates:17:18678375..18710999(-)


>ENSPPYG00000008051
ATGACGATGCCAGTCAACGGGGCCCAAAAGGATGCTGACCTGTGGTCCTCACATGACAAGATGCTGGCACAACCCCTCAA
AGACAGTGATGTTGAGGTTTACAACATCATTAAGAAGGAGAGTAACCGGCAGAGGGTTGGATTGGAGCTGATTGCCTCGG
AGAATTTCGCCAGCCGAGCAGTTTTGGAGGCCCTAGGCTCTTGCTTAAATAACAAATACTCTGAGGGGTACCCGGGCCAG
AGATACTATGGCGGGACTGAGTTTATTGATGAACTGGAGACCCTCTGTCAGAAGCGAGCCCTGCAGGCCTATAAGCTGGA
CCCACAGTGCTGGGGGGTCAACGTCCAGCCCTACTCAGGCTCCCCTGCAAACTTCGCTGTGTACACTGCCCTGGTGGAAC
CCCATGGGCGCATCATGGGCCTGGACCTGCCGGATGGGGGCCACCTGACCCATGGGTTCATGACAGACAAGAAGAAAATC
TCTGCCACATCCATCTTCTTTGAATCTATGCCCTATAAGGTGAACCCAGACACTGGCTACATCAACTATGACCAGCTGGA
GGAGAATGCACGCCTCTTCCACCCGAAGCTGATCATCGCAGGAACCAGCTGCTACTCCCGAAACCTGGACTATGCCCGGC
TGCGGAAGATTGCAGATGAGAACGGGGCGTATCTCATGGCGGACATGGCTCACATCAGCGGGCTGGTGGCGGCTGGTGTG
GTGCCCTCCCCATTTGAACACTGCCACGTGGTGACCACCACCACTCACAAGACCCTGCGAGGCTGCCGAGCTGGCATGAT
CTTCTACCGGAAAGGAGTGCAAAGTGTGGATCCCAAGACTGGCAAAGAGATTCTGTACAACCTGGAGTCTCTCATCAATT
CTGCTGTGTTCCCTGGCCTGCAGGGAGGTCCCCACAACCACGCCATTGCGGGGGTTGCTGTGGCACTGAAGCAAGCTATG
ACTCTGGAATTTAAAGTTTATCAACACCAGGTGGTGGCCAACTGCAGGGCTCTGTCTGAGGCACTGACGGAGCTGGGCTA
CAAAATAGTCACAGGTGGTTCTGACAACCATTTGATCCTCGTGGATCTCCGTTCCAAAGGCACAGATGGTGGAAGGGCTG
AGAAGGTGCTAGAAGCCTGTTCTATTGCCTGCAACAAGAACACCTGTCCAGGTGACAGAAGCGCTCTGCGGCCCAGTGGA
CTGCGGCTGGGGACCCCAGCACTGACGTCCCGTGGACTTTTGGAAAAAGACTTCCAAAAAGTAGCCCACTTTATTCACAG
AGGGATAGAGCTGACCCTGCAGATCCAGAGCGACACTGGTGTCAGAGCCACCCTGAAGGAGTTCAAGGAGAGACTGGCAG
GGGATAAGTACCAGGGGGCCGTGCAGGCTCTCCGGGAGAAGGTTGAGAGCTTCGCCTCTCTCTTCCCTCTGCCTGGCCTG
CCTGACTTCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .15 RPM
SRP007412_cerebellum 9 .24 RPM
SRP007412_heart 1 .26 RPM
SRP007412_kidney 191 .99 RPM
SRP007412_liver 436 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Macaca mulatta ENSMMUG00000013535 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_333 81.12 77.02
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Download FASTA sequences of all ENSPPYG00000008051 retrocopies