Parental gene: | MMU.1618, ENSMMUG00000019763 |
| Aliases: | None |
| Description: | protein DEK [Source:RefSeq peptide;Acc:NP_001244457] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 4:18271223..18295772(-) |
>ENSMMUG00000019763
ATGCTTGTAGGGATGAAAAAATTTTTTATGCAGCCATTGCCAAAATCTAAAAAAACTTCTAGCAAAGGCAGTAAAAAGGA
ACGGAACAGTTCTGGAATGGCAAGGAAGGCTAAGCGAACCAAATGTCCTGAAATTCTGTCAGATGAATCTAGTAGTGATG
AAGATGAAAAGAAAAACAAGGAAGAGTCTTCAGATGATGACGATAAAGAAAGTGAAGAGGAGCAGCCACCAAAAAAGACA
GCCAAAAGAGAAAAACCTAAACAGAAAGCTACTTCTAAAAGTAAAAAATCTGTGAAAAGTGCCAATGTTAAGAAGGCAGA
TAGCAGCACCACCAAGAAGAATCAAAACAGTTCCAAAAAAGAAAGTGAGTCTGAGGATAGTTCAGATGATGAACCTTTAA
TTAAAAAGTTGAAGAAACCCCCTACAGATGAAGAATTAAAGGAAACAATAAAGAAATTACTGGCCAGTGCTAACTTGGAA
GAAGTCACAATGAAACAGATTTGCAAAAAGGTCTATGAAAATTATCCTACTTATGATTTAACTGAAAGGAAAGATTTCAT
AAAAACAACTGTAAAAGAGCTAATTTCTTGA
ATGCTTGTAGGGATGAAAAAATTTTTTATGCAGCCATTGCCAAAATCTAAAAAAACTTCTAGCAAAGGCAGTAAAAAGGA
ACGGAACAGTTCTGGAATGGCAAGGAAGGCTAAGCGAACCAAATGTCCTGAAATTCTGTCAGATGAATCTAGTAGTGATG
AAGATGAAAAGAAAAACAAGGAAGAGTCTTCAGATGATGACGATAAAGAAAGTGAAGAGGAGCAGCCACCAAAAAAGACA
GCCAAAAGAGAAAAACCTAAACAGAAAGCTACTTCTAAAAGTAAAAAATCTGTGAAAAGTGCCAATGTTAAGAAGGCAGA
TAGCAGCACCACCAAGAAGAATCAAAACAGTTCCAAAAAAGAAAGTGAGTCTGAGGATAGTTCAGATGATGAACCTTTAA
TTAAAAAGTTGAAGAAACCCCCTACAGATGAAGAATTAAAGGAAACAATAAAGAAATTACTGGCCAGTGCTAACTTGGAA
GAAGTCACAATGAAACAGATTTGCAAAAAGGTCTATGAAAATTATCCTACTTATGATTTAACTGAAAGGAAAGATTTCAT
AAAAACAACTGTAAAAGAGCTAATTTCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .28 RPM |
| SRP007412_brain | 4 .82 RPM |
| SRP007412_cerebellum | 8 .39 RPM |
| SRP007412_heart | 4 .24 RPM |
| SRP007412_kidney | 5 .99 RPM |
| SRP007412_liver | 1 .31 RPM |
| SRP007412_testis | 1 .47 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000010184 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000018188 | ortholog_one2many | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000004470 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000003869 | possible_ortholog | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007750 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000001075 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1266 | 86.14 | 50.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_2627 | 91.01 | 94.90 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000019763 retrocopies