Parental gene:

MMU.2698, ENSMMUG00000020112

Aliases:None
Description:T-complex protein 1 subunit epsilon [Source:RefSeq peptide;Acc:NP_001245118]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:6:10181503..10197810(+)


>ENSMMUG00000020112
ATGGCGTCTATGGGGACCCTCGCCTTCGATGAATATGGGCGCCCTTTTCTCATCATCAAGGATCAGGACCGCAAGTCCCG
TCTTATGGGACTTGAGGCCCTTAAGTCTCATATAATGGCAGCAAAGGCTGTAGCAAATACAATGAGAACGTCACTTGGAC
CAAATGGGCTTGATAAGATGATGGTGGATAAGGATGGCGATGTGACTGTAACTAATGACGGGGCCACCATCTTAAGCATG
ATGGATGTTGATCATCAGATTGCCAAGCTGATGGTGGAACTGTCCAAGTCTCAGGATGATGAAATTGGAGATGGAACCAC
AGGAGTGGTTGTCCTGGCTGGTGCCTTGTTAGAAGAAGCGGAGCAATTGCTAGACCGAGGCATTCACCCTATCAGAATAG
CTGATGGCTATGAGCAGGCTGCCCGCGTTGCTATTGAACACCTGGACAAGATCAGTGATAGCGTCCTTGTTGACATAAAG
GACACCGAACCCCTGATTCAGACAGCAAAAACCACGCTGGGCTCCAAAGTGGTCAACAGTTGTCACCGACAGATGGCTGA
GATTGCTGTGAATGCCGTCCTCACTGTAGCAGATATGGAGCGGAGAGATGTTGACTTTGAGCTTATCAAAGTAGAAGGCA
AAGTGGGCGGCAGGCTGGAGGACACTAAATTGATTAAGGGCGTGATTGTGGACAAGGATTTCAGTCACCCACAGATGCCG
AAAAAAGTGGAAGATGCTAAGATTGCAATTCTCACATGTCCATTTGAACCACCCAAACCAAAAACAAAGCATAAGCTGGA
TGTGACGTCTGTTGAAGATTATAAAGCCCTTCAGAAATACGAAAAGGAGAAATTTGAAGAGATGATTCAACAAATTAAAG
AGACTGGTGCTAACCTAGCAATTTGTCAGTGGGGTTTTGATGATGAAGCAAATCACTTACTTCTTCAGAACAACTTGCCT
GCGGTTCGCTGGGTAGGAGGACCTGAAATTGAGCTGATTGCCATCGCTACAGGAGGTCGCATCGTCCCCAGGTTCTCAGA
GCTCACAGCCGAGAAGCTGGGCTTTGCTGGTCTTGTACAGGAGATCTCATTTGGGACAACTAAGGATAAAATGCTGGTCA
TCGAGCAGTGTAAGAACTCCAGAGCTGTAACCATTTTTATTAGAGGAGGAAATAAGATGATCATTGAGGAGGCGAAACGA
TCCCTTCACGATGCATTGTGTGTCATCCGGAACCTCATCCGCGATAATCGTGTGGTGTATGGAGGAGGGGCTGCTGAGAT
ATCCTGTGCCCTGGCAGTTAGCCAAGAGGCGGATAAGTGCCCCACTTTAGAACAGTACGCCATGAGAGCATTTGCCGACG
CGCTGGAGGTCATCCCCATGGCCCTCTCTGAAAACAGTGGCATGAATCCCATCCAGACGATGACCGAAGTCCGAGCCAGA
CAGGTGAAGGAGATGAACCCTGCTCTTGGCATCGACTGTTTGCACAAGGGGACAAATGATATGAAGCAACAGCATGTCAT
AGAAACCTTGATTGGCAAAAAGCAACAGATATCTCTTGCAACACAAATGGTTAGAATGATTTTGAAGATTGATGACATTC
GTAAGCCTGGAGAATCTGAAGAATGA

Library Parental gene expression (RPM)
SRP007412_brain 66 .33 RPM
SRP007412_brain_prefrontal_cortex 69 .89 RPM
SRP007412_cerebellum 63 .09 RPM
SRP007412_heart 73 .02 RPM
SRP007412_kidney 88 .14 RPM
SRP007412_liver 63 .69 RPM
SRP007412_testis 362 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000008977 ortholog_one2many 1 retrogene
retro_cjac_516,
Homo sapiens ENSG00000150753 ortholog_one2one 2 retrogenes
retro_hsap_1219, retro_hsap_3230,
Gorilla gorilla ENSGGOG00000024064 ortholog_one2one 1 retrogene
retro_ggor_2197,
Monodelphis domestica ENSMODG00000002356 ortholog_one2one 1 retrogene
retro_mdom_861,
Pan troglodytes ENSPTRG00000016725 ortholog_one2one 2 retrogenes
retro_ptro_2182, retro_ptro_834,
Tupaia belangeri ENSTBEG00000001201 ortholog_one2one 2 retrogenes
retro_tbel_1618, retro_tbel_4389,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1294 85.85 100.00
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2. retro_mmul_2033 82.33 57.86
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Download FASTA sequences of all ENSMMUG00000020112 retrocopies