Parental gene:

BAG1, ENSMMUG00000020148

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:15:43962655..43973679(+)


>ENSMMUG00000020148
CTGGCTCAACGCGGCGGGGCGAGGAGACCACGAGGCGACCGGGAGCGGCTGGGCTCTCGGCTGCGCGCCCTTCGGCCAGG
CCGGGAGCCGCGCCAGTCGGAGCCCCCGGCCCAGCGTGGCCCGCCTCCCTCTCGGCGTCCACCTGTCCGGGGTGCTGCCA
GCGGGCATGACCGACCCACCAGGGGCGCCGCCGCCGGCGCTCGCAGGCCGCGGATGAAGAAGAAGACCCGGCGCCGCTCG
ACCCGGAGCGAGGAATTGACCCGGAGCGAGGAGTTGACCCTGAGTGAGGAGGCAACGCGGAGCGAAGAGGCGACCCAGAG
TGAGGAGGCGACTCGGAGCGAAGAGATGAATCGGAGCCAGGAGGTGACCCCGGACGAGGAGGCGACCCAGAGCGAGGAGG
TGACCAGGGAGGAAATGGCGGCACCTGGGCTCACCGTGACTGTCACCCACAGCAATGAGAAGCACGACCTTCATGTTACC
CCGCAGCAGGGCAGCAGTGAACCAGTTGTCCAAGACCTGGCCCAGGTTGTTGAAGAGGCCATAGGGGTTCCACAGTCTTT
TCAGAAACTCATATTTAAGGGAAAATCCCTGAAGGAAATGGAAACACCATTGTCAGCACTTGGAATACAAGATGGTTGCC
GGGTCATGTTAATTGGAAAAAAGAACAGTCCAGAGGAAGAGGTTGAACTAAAGAAGTTGAAACATTTGGAGAAGTCTGTG
GAGAAGATAGCTGACCAGCTGGAAGAGTTGAATAAAGAGCTTACTGGAATACAGCAGGGTTTTCTGCCCAAGGATTTACA
AGCTGAAGCTCTCTGCAAACTTGATAGGAGAGTAAAAGCCACAATAGAGCAGTTTATGAAGATCTTGGAGGAGATTGACA
CACTGATCCTGCCAGAAAATTTCAAAGACAGTAGATTGAAAAGGAAAGGCTTGGTAAAAAAGGTTCAGGCATTCCTAGCT
GAGTGTGACGCAGTGGAGCAGAACATCTGCCAGGAGACAGAGCGGCTGCAGTCTACAAACTTTGCCCTGGCCGAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 19 .94 RPM
SRP007412_brain_prefrontal_cortex 22 .37 RPM
SRP007412_cerebellum 19 .89 RPM
SRP007412_heart 24 .08 RPM
SRP007412_kidney 33 .92 RPM
SRP007412_liver 8 .99 RPM
SRP007412_testis 124 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017845 ortholog_one2one 1 retrogene
retro_btau_901,
Choloepus hoffmanni ENSCHOG00000012656 ortholog_one2one 1 retrogene
retro_chof_2328,
Callithrix jacchus ENSCJAG00000008074 ortholog_one2one 1 retrogene
retro_cjac_4052,
Equus caballus ENSECAG00000017942 ortholog_one2one 1 retrogene
retro_ecab_267,
Homo sapiens ENSG00000107262 ortholog_one2one 1 retrogene
retro_hsap_4673,
Gorilla gorilla ENSGGOG00000016534 ortholog_one2one 1 retrogene
retro_ggor_2899,
Nomascus leucogenys ENSNLEG00000005204 ortholog_one2one 1 retrogene
retro_nleu_2165,
Oryctolagus cuniculus ENSOCUG00000008945 ortholog_one2many 1 retrogene
retro_ocun_481,
Pongo abelii ENSPPYG00000019138 ortholog_one2one 1 retrogene
retro_pabe_3630,
Pan troglodytes ENSPTRG00000020856 ortholog_one2one 1 retrogene
retro_ptro_3105,
Tursiops truncatus ENSTTRG00000010573 ortholog_one2one 2 retrogenes
retro_ttru_252, retro_ttru_946,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2487 75.41 52.75
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Download FASTA sequences of all ENSMMUG00000020148 retrocopies