Parental gene:

BAG1, ENSPPYG00000019138

Aliases:None
Description:BCL2-associated athanogene [Source:HGNC Symbol;Acc:937]
Organism:Orangutan (Pongo abelii)
Coordinates:9:28377623..28389740(+)


>ENSPPYG00000019138
CTGGCTAAGCGCGGCGGGGCGCGGAGACCGCGAGGCGACCGGGAGCGGCTGGGTTCCCGGCTGCGCGCCCTTCGGCCAGG
CCGGGAGCCGCGCCAGTCGGAGTCCCCGGCCCAGCGTGGCCCGCCTCCCTCTCGGCGTCCACCTGGCCGGGGTACTGCCA
GCGGGCATGACCGACCCACCAGGGGCGCCGCCGCCGGCGCTCGCAGGCCGCGGATGAAGAAGAAAACCCGGCGCCGCTCG
ACCCGGAGCGAGGAATTGACCCGGAGCGAGGAGTTGACCCTGAGTGAGGAAGCGACCTGGAGTGAAGAGGCAACCCAGAG
TGAGGAGGCGACCCAGGGCGAAGAGATGAATCGGAGCCAGGAGGTGACCCGGGACGAGGAGGCGACCCGGAGCGAGGAGG
TGACCAGGAAGGAAATGGCGGCAGCTGGGCTCACCGTGACTATCACCCACAGCAATGAGAAGCACGACCTTCATGTTACC
CCGAAGCAGGGCAGCAGTGAACCAGTTGTCCAAGACCTGGCCCAGGTTGTTGAAGAGGTCATAGGGGTTCCACAGTCTTT
TCAGAAACTCATATTTAAGGGAAAATCTCTGAAGGAAATGGAAACACCGTTGTCAGCACTTGGAATACAAGATGGTTGCC
GGGTCATGTTAATTGGGAAAAAGAACAGTCCACAGGAAGAGGTTGAACTAAAGAAGTTGAAACATTTGGAGAAGTCTGTG
GAGAAGATAGCTGACCAGCTGGAAGAGTTGAATAAAGAACTTACTGGAATCCAGCAGGGTTTTCTGCCCAAGAATTTGCA
AGCTGAAGCTCTCTGCAAACTTGATAGGAGAGTAAAAGCCACAATAGAGCAGTTTATGAAGATCTTGGAGGAGATTGACA
CACTGATCCTGCCAGAAAATTTCAAAGACAGTAGATTGAAAAGGAAAGGCTTGGTAAAAAAGGTTCAGGCATTCCTAGCC
GAGTGTGACACAGTGGAGCAGAACATCTGCCAGGAGACCGAGCGGCTGCAGTCTACAAACTTTGCCCTGGCCGAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 96 .43 RPM
SRP007412_cerebellum 83 .42 RPM
SRP007412_heart 40 .37 RPM
SRP007412_kidney 78 .52 RPM
SRP007412_liver 40 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017845 ortholog_one2one 1 retrogene
retro_btau_901,
Choloepus hoffmanni ENSCHOG00000012656 ortholog_one2one 1 retrogene
retro_chof_2328,
Callithrix jacchus ENSCJAG00000008074 ortholog_one2one 1 retrogene
retro_cjac_4052,
Equus caballus ENSECAG00000017942 ortholog_one2one 1 retrogene
retro_ecab_267,
Homo sapiens ENSG00000107262 ortholog_one2one 1 retrogene
retro_hsap_4673,
Gorilla gorilla ENSGGOG00000016534 ortholog_one2one 1 retrogene
retro_ggor_2899,
Macaca mulatta ENSMMUG00000020148 ortholog_one2one 1 retrogene
retro_mmul_2487,
Nomascus leucogenys ENSNLEG00000005204 ortholog_one2one 1 retrogene
retro_nleu_2165,
Oryctolagus cuniculus ENSOCUG00000008945 ortholog_one2many 1 retrogene
retro_ocun_481,
Pan troglodytes ENSPTRG00000020856 ortholog_one2one 1 retrogene
retro_ptro_3105,
Tursiops truncatus ENSTTRG00000010573 ortholog_one2one 2 retrogenes
retro_ttru_252, retro_ttru_946,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_3630 74.86 52.75
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Download FASTA sequences of all ENSPPYG00000019138 retrocopies