Parental gene: | C11orf54, ENSMODG00000000412 |
| Aliases: | None |
| Description: | chromosome 11 open reading frame 54 [Source:HGNC Symbol;Acc:30204] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 4:265416221..265433935(-) |
>ENSMODG00000000412
ATGTTAGTTCTACAGAATGGACTTAAAAATAATTTTGCTGATGTCCAGGTCTCCGTAGTTGATTGCCCTGATCTGTCTAA
GGAACCATATACATTTCCTGTTAAAGGAATCTGTGGGAAACCGAGAATTGCAGAAGTAGGTGGGGTTCCTTACCTCATGC
CTCTTGTGAATCGAGAAAAGGTTTATGATATGAATACTGTTGCAAAGCAAATTGATCTTCCTGGGGCTTTTATTCTTGGA
GCAGGAGCAGCCCCATTTCAGACTCTTGGGATCAATGCTGAGTTTATGCCAATTGTCCAGACTGAAAGTGATCACAAGCC
TGCTGTGAATGGAAGCTACTTTGCCCAGATTAACCCTGCAGATGGAGGGTACCTGCTAGAGAAATATAGTGGGAAATACA
ATGACTTTGGATTTGCCTTACTGGCTAATCTCTTTGCTAGTGAAGGCCAGCCTGGCAAGATTTTAGAGCTAGTAAAAGCC
AAAGGAAGAACTGGAAAGTACAATTTTGTGACTTGTATGAGACAAACTCTTGAAAAGCATTATGGAGATAAACCTGTAGG
GATGGGAGGCACATTTGTTGTTCAAAAAGGAAAAGTAAAGATTCATATCATGCCCCCAGAATTTTCTTCTTGCCCACTGA
ACTCTGATGAAGATGTGAATAATTGGTTGCATTTTTTTGAAATCAAGGCTCCTTTGGTTTGTCAGCCAGTTTTTGTTTCT
CGAGACCCGGGGTTTGATTTACGATTAGAGCATACACACTGTTTTAGTCATCATGGAGAAGGAGGACACTATCATTATGA
CACCACTCCAGATACAGTGGAGTATCTTGGGTATTTCCTACCTGCTGAGGTTCTCTATCGAATTGATAAACCAAAGGACA
CCCATACATTTGGGCGAGATTAA
ATGTTAGTTCTACAGAATGGACTTAAAAATAATTTTGCTGATGTCCAGGTCTCCGTAGTTGATTGCCCTGATCTGTCTAA
GGAACCATATACATTTCCTGTTAAAGGAATCTGTGGGAAACCGAGAATTGCAGAAGTAGGTGGGGTTCCTTACCTCATGC
CTCTTGTGAATCGAGAAAAGGTTTATGATATGAATACTGTTGCAAAGCAAATTGATCTTCCTGGGGCTTTTATTCTTGGA
GCAGGAGCAGCCCCATTTCAGACTCTTGGGATCAATGCTGAGTTTATGCCAATTGTCCAGACTGAAAGTGATCACAAGCC
TGCTGTGAATGGAAGCTACTTTGCCCAGATTAACCCTGCAGATGGAGGGTACCTGCTAGAGAAATATAGTGGGAAATACA
ATGACTTTGGATTTGCCTTACTGGCTAATCTCTTTGCTAGTGAAGGCCAGCCTGGCAAGATTTTAGAGCTAGTAAAAGCC
AAAGGAAGAACTGGAAAGTACAATTTTGTGACTTGTATGAGACAAACTCTTGAAAAGCATTATGGAGATAAACCTGTAGG
GATGGGAGGCACATTTGTTGTTCAAAAAGGAAAAGTAAAGATTCATATCATGCCCCCAGAATTTTCTTCTTGCCCACTGA
ACTCTGATGAAGATGTGAATAATTGGTTGCATTTTTTTGAAATCAAGGCTCCTTTGGTTTGTCAGCCAGTTTTTGTTTCT
CGAGACCCGGGGTTTGATTTACGATTAGAGCATACACACTGTTTTAGTCATCATGGAGAAGGAGGACACTATCATTATGA
CACCACTCCAGATACAGTGGAGTATCTTGGGTATTTCCTACCTGCTGAGGTTCTCTATCGAATTGATAAACCAAAGGACA
CCCATACATTTGGGCGAGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013446 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000014146 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002523 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000007819 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000001140 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_852 | 82.86 | 57.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1467 | 94.97 | 99.33 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000000412 retrocopies