Parental gene:

EIF2S2, ENSMODG00000002805

Aliases:None
Description:eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa [Source:HGNC Symbol;Acc:3266]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:387441913..387460943(-)


>ENSMODG00000002805
ATGTCCGGGGACGAGATGATTTTCGATCCTACTATGAGCAAGAAGAAGAAAAAGAAGAAGAAGCCTTTTATGCTGGATGA
AGAAGGAGATGCACAGACAGAAGAAACACAACCCTCAGAAACAAAAGAAACTGAACCAGAGCCAACAGAGGACAAAGATG
TAGAAGCTGATGAAGAGGATGGTAGAAAGAAAGATGCTTCTGATGACCTGGATGACTTAAACTTTTTCAATCAAAAGAAA
AAGAAGAAAAAAACAAAAAAGATATTTGATATTGATGAAGCTGAAGAAGGTGTTAAGGACCTAAAGATTGAAAGTGATGT
GCAAGAACCAGCAGAACCAGAAGATGACCTTGATATTATGCTTGGCAACAAAAAGAAGAAAAAGAAGAATGTCAAGTTCC
CAGATGAGGATGAAATCCTAGAGAAAGATGAAGCCTTAGAAGATGAAGACAGCAAAAAGGATGATGGAATCTCCTTCAGC
AATCAGACTGGCCCTGCATGGGCAGGTTCAGAAAGAGACTATACTTATGATGAGTTGCTGAATCGAGTATTCAACATAAT
GCGGGAAAAGAATCCAGATATGGTTGCTGGAGAAAAAAGAAAATTTGTCATGAAACCTCCACAGGTTGTTAGAGTAGGAA
CCAAGAAAACTTCTTTTGTCAACTTCACAGATATCTGTAAACTATTACATCGTCAGCCCAAACATCTCCTGGCATTTTTA
TTGGCTGAGTTGGGTACAAGTGGTTCCATAGATGGTAATAATCAACTTGTAATCAAAGGAAGATTCCAACAGAAACAGAT
AGAAAACGTCTTGAGAAGATATATCAAGGAGTATGTCACCTGCCATACATGTCGGTCACCAGACACAATCCTACAGAAGG
ATACACGACTCTATTTCTTACAGTGTGAGACCTGCCATTCTCGCTGCTCCGTCGCCAGCATCAAAACTGGGTTCCAGGCC
GTCACAGGCAAGCGAGCACAGCTCCGTGCCAAAGCTAACTAA

Library Parental gene expression (RPM)
SRP007412_brain 320 .52 RPM
SRP007412_cerebellum 255 .29 RPM
SRP007412_heart 286 .87 RPM
SRP007412_kidney 377 .93 RPM
SRP007412_liver 388 .69 RPM
SRP007412_testis 1198 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000007498 ortholog_one2one 1 retrogene
retro_cfam_2070,
Choloepus hoffmanni ENSCHOG00000006521 ortholog_one2one 1 retrogene
retro_chof_271,
Callithrix jacchus ENSCJAG00000018334 ortholog_one2many 2 retrogenes
retro_cjac_4196, retro_cjac_697,
Cavia porcellus ENSCPOG00000015439 ortholog_one2many 1 retrogene
retro_cpor_1143,
Echinops telfairi ENSETEG00000001922 ortholog_one2many 1 retrogene
retro_etel_1101,
Homo sapiens ENSG00000125977 ortholog_one2one 3 retrogenes
retro_hsap_2176, retro_hsap_2260, retro_hsap_713,
Gorilla gorilla ENSGGOG00000015546 ortholog_one2one 5 retrogenes
retro_ggor_1683, retro_ggor_1726, retro_ggor_2007, retro_ggor_280, retro_ggor_604,
Microcebus murinus ENSMICG00000006944 ortholog_one2one 1 retrogene
retro_mmur_1583,
Myotis lucifugus ENSMLUG00000005335 ortholog_one2one 1 retrogene
retro_mluc_604,
Macaca mulatta ENSMMUG00000018095 ortholog_one2one 1 retrogene
retro_mmul_1483,
Mus musculus ENSMUSG00000074656 ortholog_one2one 1 retrogene
retro_mmus_3200,
Nomascus leucogenys ENSNLEG00000010034 ortholog_one2one 2 retrogenes
retro_nleu_2242, retro_nleu_466,
Otolemur garnettii ENSOGAG00000001417 ortholog_one2many 1 retrogene
retro_ogar_196,
Pongo abelii ENSPPYG00000010933 ortholog_one2many 2 retrogenes
retro_pabe_1955, retro_pabe_2421,
Pan troglodytes ENSPTRG00000013412 ortholog_one2one 2 retrogenes
retro_ptro_1600, retro_ptro_508,
Rattus norvegicus ENSRNOG00000017447 ortholog_one2many 1 retrogene
retro_rnor_2395,
Tupaia belangeri ENSTBEG00000009970 ortholog_one2one 2 retrogenes
retro_tbel_1505, retro_tbel_2508,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_365 86.99 73.87
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2. retro_mdom_368 78.73 79.88
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3. retro_mdom_370 76.25 89.79
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4. retro_mdom_837 74.07 64.56
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5. retro_mdom_1981 75.59 89.79
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Download FASTA sequences of all ENSMODG00000002805 retrocopies