Parental gene: | OXA1L, ENSMODG00000005347 |
| Aliases: | None |
| Description: | oxidase (cytochrome c) assembly 1-like [Source:HGNC Symbol;Acc:8526] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:171991832..171997477(+) |
>ENSMODG00000005347
ATGGCGTCGGGACGGATGTGTGGGTACTTGGAGGTTCTTCGCGTATTACGCCCTCGGCGCCAGTTCCACAGTGTCTCCCA
GAACTCGTACTGGCTTTGTGGACCACAGTGGAAACGACCACCTGGCACCAGCCTATTCCTAACTAGACAAAGGGGAAAAT
TATCTCCCTGTGTCTACCACTTGGGCCCAACCCCACGGTACCTCAGCACCTCCACTGCCCTGTTTGCAGAAAGCCAGGTG
CAGACCTCTCCCATTCTCCCTGCAGCCCCTTCCCCACCATCAGTGACAGAGGTAGTTCCAGGTGGAGCTGCTGATGCAGT
CCAGGCTGCCACAGAGCAGAGCCTAAGTGACCTGGGACTAGGAGGCTTCACCCCAGTGGGACTCGTGCAGAACCTTTTGG
AGTTTGTACATGTTGATCTGGGCCTGCCATGGTGGGGAGCCATTGTTACATGCACTGTTGTTGCAAGAATCATGATTTTC
CCCCTCATTGTGAAAGGCCAACGGGAGGCAGTGAAGATCAATAACCACATGCCCGAGATTCAAAAATTTTCCACCCGAAT
GAATGAGGCCAAGTTATCAGGGGACAAATTTGAATTTTCCAGGGCCTTTTCAGAACTACAACTTTACCAGAAGAAACATG
ATGTGAGCCCTTTGAGAGGATTCATTGTTCCTCTAGCCCAGGCTCCTGTCTTCATCTCCTTCTTCATTGCACTGAGAGAA
ATGGCCTATCTCCCTGTGCCCAGCATGCAGAATGGTGGTCTCTGGTGGTTCCAGGATCTCACAGCAGCTGACCCCCTATA
TGCATTGCCCTTGTTAGTCACAGCATCAATGTGGGCAATCCTGGAGCTGGGTGCTGAAACTGGTGTCAACAATGCCAACC
TTCGTATGATGAAAACTGTCTTCCGAGTGCTGCCCCTGATAGTCTTGCCCTTCACCATCAATTTCCCCACGGCAGTGTTC
ACATACTGGTTCTCTTCCAACCTCTTCTCGCTGGCCCAAGTGAGCTTCCTTCAGATCCCAGCTGTACGTATTTGGCTTAG
AATTCCAAAGCGAATCACACATGAGCCAAGCCAGTTGCCTACACAGGAGGGCCTCATTAAGAGCATCAAAACAGGCTGGA
AAAATGCCCAAACAGCTCACCAGCTAAAGGAGCGGGAGCGTCGCATGAGGGATCACCTGCAGCTTGCAGCTCGAGGTCCC
TTACGACAGACCTTTACCCACAACCCCTTGTTACAGCCTGAAGGTAAACAGCCTCCTACTACCACCAGTACCAGCAGTAA
ACCAAAGTCACAGAAGCCCTGGAGGGATACTCTTGGATGA
ATGGCGTCGGGACGGATGTGTGGGTACTTGGAGGTTCTTCGCGTATTACGCCCTCGGCGCCAGTTCCACAGTGTCTCCCA
GAACTCGTACTGGCTTTGTGGACCACAGTGGAAACGACCACCTGGCACCAGCCTATTCCTAACTAGACAAAGGGGAAAAT
TATCTCCCTGTGTCTACCACTTGGGCCCAACCCCACGGTACCTCAGCACCTCCACTGCCCTGTTTGCAGAAAGCCAGGTG
CAGACCTCTCCCATTCTCCCTGCAGCCCCTTCCCCACCATCAGTGACAGAGGTAGTTCCAGGTGGAGCTGCTGATGCAGT
CCAGGCTGCCACAGAGCAGAGCCTAAGTGACCTGGGACTAGGAGGCTTCACCCCAGTGGGACTCGTGCAGAACCTTTTGG
AGTTTGTACATGTTGATCTGGGCCTGCCATGGTGGGGAGCCATTGTTACATGCACTGTTGTTGCAAGAATCATGATTTTC
CCCCTCATTGTGAAAGGCCAACGGGAGGCAGTGAAGATCAATAACCACATGCCCGAGATTCAAAAATTTTCCACCCGAAT
GAATGAGGCCAAGTTATCAGGGGACAAATTTGAATTTTCCAGGGCCTTTTCAGAACTACAACTTTACCAGAAGAAACATG
ATGTGAGCCCTTTGAGAGGATTCATTGTTCCTCTAGCCCAGGCTCCTGTCTTCATCTCCTTCTTCATTGCACTGAGAGAA
ATGGCCTATCTCCCTGTGCCCAGCATGCAGAATGGTGGTCTCTGGTGGTTCCAGGATCTCACAGCAGCTGACCCCCTATA
TGCATTGCCCTTGTTAGTCACAGCATCAATGTGGGCAATCCTGGAGCTGGGTGCTGAAACTGGTGTCAACAATGCCAACC
TTCGTATGATGAAAACTGTCTTCCGAGTGCTGCCCCTGATAGTCTTGCCCTTCACCATCAATTTCCCCACGGCAGTGTTC
ACATACTGGTTCTCTTCCAACCTCTTCTCGCTGGCCCAAGTGAGCTTCCTTCAGATCCCAGCTGTACGTATTTGGCTTAG
AATTCCAAAGCGAATCACACATGAGCCAAGCCAGTTGCCTACACAGGAGGGCCTCATTAAGAGCATCAAAACAGGCTGGA
AAAATGCCCAAACAGCTCACCAGCTAAAGGAGCGGGAGCGTCGCATGAGGGATCACCTGCAGCTTGCAGCTCGAGGTCCC
TTACGACAGACCTTTACCCACAACCCCTTGTTACAGCCTGAAGGTAAACAGCCTCCTACTACCACCAGTACCAGCAGTAA
ACCAAAGTCACAGAAGCCCTGGAGGGATACTCTTGGATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 16 .69 RPM |
| SRP007412_cerebellum | 42 .44 RPM |
| SRP007412_heart | 71 .97 RPM |
| SRP007412_kidney | 71 .11 RPM |
| SRP007412_liver | 61 .43 RPM |
| SRP007412_testis | 23 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000012893 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000000720 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000631 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000003318 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1308 | 89.53 | 77.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000005347 retrocopies