Parental gene:

ENSMODG00000009978

Aliases:None
Description:None
Organism:Opossum (Monodelphis domestica)
Coordinates:1:271961637..272001435(+)


>ENSMODG00000009978
ATGGGCGGGGACTGTGGAGAAGGTGTGCCGGAGGCCTGCGGGAGGCGGAGCTTCGAGGCTAGAGCCCGTGACGCGGTCTG
GGAGGGGGCGGAGTGTTACCGGCTCCGAGCTCGCGGAGCTGGCCTGTTATCAGTCATGTCTTTGAGGAGCAGTCTCTCGA
GGCTTTTTCAGAAGCAAGCTCATTCCGCATTCAAGAAATCCGTTCACTCGGTGGCTGTGATCGGAGCTCCGTTCTCCAAG
GGGCAGAAACGAAGAGGAGTAGAACATGGTCCTTCAGCCATAAGAGAGGCAGGGTTATTGAAAAGGCTCTCCAACTTGGG
TTGCCGGGTGAATGACTTGGGAGATCTGAGTTTCACTCCTGTGGCCAGTGATGAGTGCTACAATAACCTAATTGTGAATC
CTCGATCAGTGGGCCTTGCCAACCAAGAATTGGCTGAGGCAGTTAGCAGGGCTGTCTCTTCTGGTCACCGCTGCATCACT
GTGGGAGGAGACCACAGTTTGGCAATTGGTTCCATTAGTGGCCATGTTCGGCACTGCCCAGACTTGTGTGTTATCTGGGT
TGACGCTCATGCTGATATCAACACACCCCTTACCACTTTGTCAGGGAGTCTGCATGGACAGCCAGTCTCCTTCCTCCTTA
GAGAACTACAGGACAAGGTACCATCTCTCCCAGGATTCTCTTGGATCAAGCCCTGTCTCTCATCCCCAGATATTGTGTAT
ATTGGCCTAAGAGATGTGGATCCTGCTGAACATTTTATTCTAAAAAATTATGACATTTTATACTTTTCAATGAGAGATAT
TGATCGTCTTGGAATCCAGAAGGTCATGGAACAGACATTTGACCAACTGATCAGCAAAAAACAACGACCAATTCATCTGA
GCTTTGACATTGATGCTTTCGACCCTTCGCTGGCTCCAGCAACAGGGACTCCTGTTGTGGGTGGGCTGACTTATCGAGAA
GGCATGTACATTACTGAGGAGGTACATAATACAGGTTTGCTGTCGGCCCTGGATCTAGTTGAAGTCAATCCTCTCTTGGC
TACTTCGGAGGAGGATGTGAAGGCCACAGCGGGGCTAGCTGTGGATGTGATTGCCTCAAGCTTTGGCCAGAAGAGGGCAG
GAGGGCACAGTGGCTATGATCAGCTTCCTACTCCCAGTTCACCAGATGAATCAGACAATGAAGAACGCGTTCGAATTTAG

Library Parental gene expression (RPM)
SRP007412_brain 54 .95 RPM
SRP007412_cerebellum 86 .18 RPM
SRP007412_heart 28 .91 RPM
SRP007412_kidney 603 .11 RPM
SRP007412_liver 39 .27 RPM
SRP007412_testis 310 .17 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000005722 ortholog_one2many 1 retrogene
retro_acar_91,
Choloepus hoffmanni ENSCHOG00000007159 ortholog_many2many 1 retrogene
retro_chof_1179,
Callithrix jacchus ENSCJAG00000015277 ortholog_one2many 4 retrogenes
retro_cjac_1933, retro_cjac_2357, retro_cjac_2561, retro_cjac_902,
Dasypus novemcinctus ENSDNOG00000004808 ortholog_one2many 1 retrogene
retro_dnov_251,
Homo sapiens ENSG00000081181 ortholog_one2many 1 retrogene
retro_hsap_3501,
Gorilla gorilla ENSGGOG00000005615 ortholog_one2many 1 retrogene
retro_ggor_2367,
Microcebus murinus ENSMICG00000010837 ortholog_one2many 1 retrogene
retro_mmur_874,
Monodelphis domestica ENSMODG00000017584 within_species_paralog 1 retrogene
retro_mdom_1318,
Nomascus leucogenys ENSNLEG00000000741 ortholog_one2many 2 retrogenes
retro_nleu_2875, retro_nleu_792,
Oryctolagus cuniculus ENSOCUG00000000584 ortholog_one2many 1 retrogene
retro_ocun_277,
Pongo abelii ENSPPYG00000005926 ortholog_one2many 1 retrogene
retro_pabe_2893,
Pan troglodytes ENSPTRG00000006467 ortholog_one2many 1 retrogene
retro_ptro_2373,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_257 92.66 71.43
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Download FASTA sequences of all ENSMODG00000009978 retrocopies