Parental gene: | ENSMODG00000011614 |
| Aliases: | None |
| Description: | None |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 6:277014356..277033216(+) |
>ENSMODG00000011614
ATGAAGCTGACGGACATCGTGCTGCGGAGCTTCCGCGTGGCCAAGGTGTTCCGGGAGAACTCGGACAAGATCAACTGCTT
CGATTTCAGCCCCAATGGCGAGACCGTCATCTCCAGCAGCGACGACGACTCCATCGTCCTGTACGACTGTCAGGAGGGCA
AACCAAAGAGAACACTGTACAGTAAGAAGTATGGAGTGGACCTAATCAGATACACACATGCAGCAAACACTGTAGTGTAC
AGTTCTAACAAAATAGATGATACAATCCGCTACCTGTCCTTGCACGATAACAAATACATCCGGTATTTCCCAGGACACAA
CAAGAGGGTGGTAGCCTTGTCCATGTCACCAATAGATGATACTTTTATCTCTGGGTCCCTGGATAAAACCATCCGACTCT
GGGATCTTCGGTCTCCTAACTGCCAGGGCCTAATGCATCTCCAAGGAAAACCAGTTTGTTCTTTTGATCCAGAAGGGTTA
ATTTTTGCTGCTGGAGTCAATTCTGAAATGGTTAAACTTTATGACCTTCGTTCTTTTGATAAGGGGCCATTTGCTACCTT
CAAAATGCAGTATGATAGGAACTGTGAGTGGACAGGTTTAAAGTTCAGCAATGATGGCAAACTCATCCTTATATCTACTA
ATGGCAGTTTCATCCGTCTGATTGATGCATTTAAGGGCGCAGTAATGCATACATTTGGGGGGTATAATAACAGTAAAGCT
GTCACATTGGAGGCCTCCTTCACTCCAGATTCTCAGTTTATCATGATTGGCTCAGATGACGGTAAAATTCATGTCTGGAA
TGGAGAAAGTGGCATAAAGGTGGCTGTGTTGGATGGGAAACATACTGGTCCCATAACCTGTTTGCAATTCAATCCCAAAT
TCATGACCTTTGCCAGTGCATGTTCTAACATGGCATTCTGGCTGCCCACCATTGATGACTGA
ATGAAGCTGACGGACATCGTGCTGCGGAGCTTCCGCGTGGCCAAGGTGTTCCGGGAGAACTCGGACAAGATCAACTGCTT
CGATTTCAGCCCCAATGGCGAGACCGTCATCTCCAGCAGCGACGACGACTCCATCGTCCTGTACGACTGTCAGGAGGGCA
AACCAAAGAGAACACTGTACAGTAAGAAGTATGGAGTGGACCTAATCAGATACACACATGCAGCAAACACTGTAGTGTAC
AGTTCTAACAAAATAGATGATACAATCCGCTACCTGTCCTTGCACGATAACAAATACATCCGGTATTTCCCAGGACACAA
CAAGAGGGTGGTAGCCTTGTCCATGTCACCAATAGATGATACTTTTATCTCTGGGTCCCTGGATAAAACCATCCGACTCT
GGGATCTTCGGTCTCCTAACTGCCAGGGCCTAATGCATCTCCAAGGAAAACCAGTTTGTTCTTTTGATCCAGAAGGGTTA
ATTTTTGCTGCTGGAGTCAATTCTGAAATGGTTAAACTTTATGACCTTCGTTCTTTTGATAAGGGGCCATTTGCTACCTT
CAAAATGCAGTATGATAGGAACTGTGAGTGGACAGGTTTAAAGTTCAGCAATGATGGCAAACTCATCCTTATATCTACTA
ATGGCAGTTTCATCCGTCTGATTGATGCATTTAAGGGCGCAGTAATGCATACATTTGGGGGGTATAATAACAGTAAAGCT
GTCACATTGGAGGCCTCCTTCACTCCAGATTCTCAGTTTATCATGATTGGCTCAGATGACGGTAAAATTCATGTCTGGAA
TGGAGAAAGTGGCATAAAGGTGGCTGTGTTGGATGGGAAACATACTGGTCCCATAACCTGTTTGCAATTCAATCCCAAAT
TCATGACCTTTGCCAGTGCATGTTCTAACATGGCATTCTGGCTGCCCACCATTGATGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000774 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000006114 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000164091 | ortholog_one2many | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000028309 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000009280 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008234 | ortholog_many2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000007104 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016032 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013812 | ortholog_many2many | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000048441 | ortholog_many2many | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_144 | 84.35 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_219 | 80.83 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_398 | 94.92 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_1259 | 91.95 | 55.59 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000011614 retrocopies