Parental gene:

WDR82, ENSPPYG00000013812

Aliases:WDR82, WDR82P1
Description:WD repeat domain 82 [Source:HGNC Symbol;Acc:28826]
Organism:Orangutan (Pongo abelii)
Coordinates:3:94075143..94100535(+)


>ENSPPYG00000013812
ATGAAGCTGACCGACAGCAGCTTCGTCGCTAAGGTGTTCCGCGAATCGGACAAGATTAACTGCTTCGATTTCAGCCCAAA
CGGCGAGACGGTCATCTCGAGTAGCGACGACGACTCCATCGTGCTCTATGACTGCCAGGAGGGCAAACCAAAGAGAACCC
TGTACAGTAAGAAATATGGTGTGGACCTCATCAGATACACTCATGCGGCAAACACAGTTGTTTACAGCTCTAACAAAATA
GACGATACTATTCGTTACTTGTCCTTGCATGACAACAAATACATCAGATACTTTCCTGGACACAGCAAAAGGGTGGTGGC
CTTGTCCATGTCACCTGTGGATGACACTTTCATTTCTGGGTCTCTTGATAAAACCATTCGACTCTGGGATCTCCGGTCTC
CTAACTGCCAGGGCCTCATGCATCTGCAGGGGAAGCCAGTTTGTTCTTTTGATCCAGAAGGGTTAATTTTCGCTGCAGGT
GTCAACTCTGAAATGGTCAAGCTTTATGACCTTCGTTCTTTTGATAAGGGGCCATTTGCTACCTTTAAGATGCAGTATGA
TCGAACTTGTGAGTGGACAGGACTTAAATTCAGCAACGATGGCAAGCTCATCCTCATTTCCACCAACGGCAGCTTCATTC
GTCTGATTGATGCATTCAAAGGAGTGGTGATGCACACGTTTGGGGGTTATGCCAACAGCAAAGCTGTCACACTGGAGGCT
TCATTTACTCCAGACTCTCAGTTTATTATGATTGGTTCAGAGGATGGCAAGATCCATGTCTGGAATGGAGAGAGTGGTAT
AAAAGTAGCTGTGTTGGATGGTAAACACACAGGCCCGATTACCTGTTTGCAATTCAACCCCAAGTTCATGACTTTTGCCA
GCGCGTGTTCCAACATGGCCTTTTGGTTGCCCACCATTGATGACTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 203 .36 RPM
SRP007412_cerebellum 194 .44 RPM
SRP007412_heart 59 .21 RPM
SRP007412_kidney 75 .08 RPM
SRP007412_liver 40 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000774 ortholog_one2many 1 retrogene
retro_chof_2299,
Callithrix jacchus ENSCJAG00000006114 ortholog_one2many 1 retrogene
retro_cjac_3022,
Homo sapiens ENSG00000164091 ortholog_one2one 2 retrogenes
retro_hsap_2816, retro_hsap_419,
Loxodonta africana ENSLAFG00000028309 ortholog_one2many 1 retrogene
retro_lafr_639,
Macropus eugenii ENSMEUG00000009280 ortholog_one2many 1 retrogene
retro_meug_1207,
Macaca mulatta ENSMMUG00000008234 ortholog_one2one 2 retrogenes
retro_mmul_339, retro_mmul_511,
Monodelphis domestica ENSMODG00000011614 ortholog_many2many 4 retrogenes
retro_mdom_1259, retro_mdom_144, retro_mdom_219, retro_mdom_398,
Nomascus leucogenys ENSNLEG00000007104 ortholog_one2one 2 retrogenes
retro_nleu_1016, retro_nleu_1195,
Otolemur garnettii ENSOGAG00000016032 ortholog_one2many 1 retrogene
retro_ogar_1314,
Rattus norvegicus ENSRNOG00000048441 ortholog_many2many 3 retrogenes
retro_rnor_1003, retro_rnor_1109, retro_rnor_1152,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_185 92.65 100.00
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2. retro_pabe_300 84.52 99.35
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Download FASTA sequences of all ENSPPYG00000013812 retrocopies