Parental gene:

ATIC, ENSMODG00000015612

Aliases:None
Description:5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase [Source:HGNC Symbol;Acc:794]
Organism:Opossum (Monodelphis domestica)
Coordinates:7:178193998..178223339(-)


>ENSMODG00000015612
ATGGCTTCCCACCAGCTCGCCTTGCTTAGTGTCTCTGACAAAACAGGACTGTTGGACTTTGCCAAAAATCTGAATTTGGT
TGGTTTGACACTAGTTGCTTCTGGAGGGACTGCAAAAGCTCTAAGAGATGCTGGTCTCACAGTCAGAGATGTTTCTGAAC
TGACAGGATTCCCAGAAATGTTAGGAGGACGTGTGAAAACACTGCATCCTGCAGTACATGCTGGAATCTTGGCACGCAAA
TCTCCAGAAGATCAAGCTGACATGGCCAGACTTGATTTCAGTCTTATAAGAATTGTTGTTTGTAATCTGTATCCCTTTGT
GAAAACTGTGGCTTCTCCAAATGTAACTGTTGAGGAAGCTGTTGAACAAATTGATATTGGTGGAGTAACTTTACTCAGAG
CTGCTGCAAAAAATCATGCTCGAGTGACAGTAGTATGTGAACCAGGAGATTATGAAGTGGTATATACTGAGATGCTAAAC
TCTGATACTAAAGATACTACTATGGAGACTAGACGGCAACTAGCATTAAAGGCCTTTACTCATACTGCTCAGTATGATCA
AGCAATATCAGATTATTTCAGAAAGGAATATAGTAAAGGAATATCTCAGATTCCTTTAAGATATGGAATGAACCCGCACC
AAAAACCTGCACAGTTATATACAGTGAAGCCCAAACTTCCTCTTACAGTTCTGAATGGATCCCCTGGGTTTATAAACCTG
TGTGATGCCTTGAATGCCTGGCAACTGGTAAAAGAACTCAGAGAAGCTTTAGGTATTTCAGCAGCTACCTCATTCAAGCA
TGTCAGTCCAGCAGGTGCTGCTGTTGGAGTACCACTTAGTGAGGAAGAGGCTAAAGTTTGCATGGTTCATGATCTCTACA
AGAGCCTAACTCCATTGTCAATTGCATATGCAAGAGCAAGAGGAGCTGATAGAATGTCATCATTTGGTGATTTTATTGCT
GTTTCTGATGTTTGTGATGTCACTACTGCTAAAATTATCTCCAGAGAGGTATCTGATGGTATTATTGCACCTGGATATGA
AGAGGAAGCCTTGAAGATTCTTTCCAAAAAGAAAAATGGAAGTTACTGTGTACTTCAGATGGACCCATGTTACAAACCAG
AAGAAGATGAAATTCGTACTCTCTTTGGATTACATCTAAGTCAGAAGAGGAATAATGGTGTTATTGACAAGTCATTATTT
AACAATATTGTTACAAAGCATAAAGATTTGCCTGAGCCTGCTATCAGAGACCTCATCGTAGCTACTATTGCTGTCAAATA
CACTCAGTCCAATTCAGTGTGCTATGCCAAGAATGGTCAGGTCATTGGTATTGGAGCAGGTCAGCAATCCCGAATACACT
GTACACGGCTTGCAGGAGATAAGGCAAATAATTGGTGGCTTAGACATCATCCTCGAGTGCTTTCAATGAAATTTAAAGCT
GGAGTAAAGAGAGCAGAAATCTCTAATGCAATTGATCAGTATGTGACTGGCACGATTGGTGAGGATGAAGATTTGGCCAA
ATGGGAAGCAATGTTTGAGGAAGTTCCTAAACTGTTAACTGATACAGAAAAGAAGGAATGGATTGATACATTGAAACAAG
TGTCTGTCAGTTCTGATGCGTTTTTCCCTTTTAGGGATAATGTAGACAGAGCTAAGAGGAGTGGTGTAGAGTTCATTGTG
GCCCCCTCAGGTTCAACTGCTGACCAGATTGTGATTGAGGCTTGTGATGAGCTTGGAATTACACTCATTCATACAAATCT
TCGACTATTTCATCACTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000011695 ortholog_one2one 4 retrogenes
retro_cjac_1538, retro_cjac_2185, retro_cjac_3116, retro_cjac_706,
Microcebus murinus ENSMICG00000014573 ortholog_one2one 1 retrogene
retro_mmur_1591,
Myotis lucifugus ENSMLUG00000001830 ortholog_one2one 1 retrogene
retro_mluc_1370,
Mustela putorius furo ENSMPUG00000007676 ortholog_one2one 1 retrogene
retro_mputfur_1609,
Mus musculus ENSMUSG00000026192 ortholog_one2one 1 retrogene
retro_mmus_2729,
Rattus norvegicus ENSRNOG00000015511 ortholog_one2one 1 retrogene
retro_rnor_904,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1074 89.64 87.50
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Download FASTA sequences of all ENSMODG00000015612 retrocopies