Parental gene:

SNAP23, ENSMODG00000017889

Aliases:None
Description:synaptosomal-associated protein, 23kDa [Source:HGNC Symbol;Acc:11131]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:200007991..200048203(+)


>ENSMODG00000017889
ATGGATAATCTATCAGCAGAAGAAATTCAGCTAAGGGCGCACCAGGTGACAGATGAGTCCCTGGAAAGTACAAGGAGAAT
CCTGGGTTTAGCAATTGAGTCTCAGGATGCAGGAATCAAAACCATCACTATGCTGGATGAACAAGGGGAAAAACTGAACC
GCATAGAAGAAGGCATGGACCAAATAAATAAAGACATGAGAGAAGCAGAGAAGACGTTAACAGAACTCAACAAATGTTGC
GGCCTTTGTGTTTGCCCTTGGAATAGGTCAGCAAATTTTGAGTCTGGCAAGGCCTATAAAGCAACATGGGCTGAAGGTGG
AGACAGTTCACCTGGTAATGTGGTTTCTAAGCAGCCAGGCCGTATGACAAATGGTCAACCTCAGCAAACAGCTGCAGGAG
GAGCCAGTGGTGGATATATTAAACGGATAACTAATGATGCCAGAGAAGATGAAATGGAAGAAAATTTGACTCAGGTGGGC
AGTATCTTGGGGAACTTGAAAACAATGGCCTTAGACATGGGCAATGAGATTGACTCTCAGAACAAACAAATAGGGAGAAT
CATTGAGAAGGCTGATACTAACAAAGATCGTATTGATCTTGCCAATGCCAAAGCAAAGAAACTCATTGATAGTTAA

Library Parental gene expression (RPM)
SRP007412_brain 12 .28 RPM
SRP007412_cerebellum 10 .45 RPM
SRP007412_heart 60 .00 RPM
SRP007412_kidney 126 .42 RPM
SRP007412_liver 74 .52 RPM
SRP007412_testis 107 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000015685 ortholog_one2many 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000015774 ortholog_one2one 1 retrogene
Bos taurus ENSBTAG00000005661 ortholog_one2one 2 retrogenes
Canis familiaris ENSCAFG00000011105 ortholog_one2one 2 retrogenes
Choloepus hoffmanni ENSCHOG00000006468 ortholog_one2many 3 retrogenes
Cavia porcellus ENSCPOG00000003638 ortholog_one2one 1 retrogene
Felis catus ENSFCAG00000013387 ortholog_one2one 1 retrogene
Loxodonta africana ENSLAFG00000005462 ortholog_one2one 1 retrogene
Microcebus murinus ENSMICG00000000813 ortholog_one2one 2 retrogenes
Mustela putorius furo ENSMPUG00000009856 ortholog_one2one 3 retrogenes
Mus musculus ENSMUSG00000027287 ortholog_one2one 1 retrogene
Rattus norvegicus ENSRNOG00000050552 ortholog_one2one 2 retrogenes
Tarsius syrichta ENSTSYG00000006589 ortholog_one2one 2 retrogenes
Tursiops truncatus ENSTTRG00000002561 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1772 91.00 99.53
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Download FASTA sequences of all ENSMODG00000017889 retrocopies