Parental gene:

Snap23, ENSMUSG00000027287

Aliases:Snap23, 23kDa, AA408749, SNAP-23, Sndt, Syndet
Description:synaptosomal-associated protein 23 [Source:MGI Symbol;Acc:MGI:109356]
Organism:Mouse (Mus musculus)
Coordinates:2:120567670..120601255(+)


>ENSMUSG00000027287
ATGGATAATCTGTCCCCAGAGGAAGTTCAGCTGCGGGCTCACCAGGTTACTGATGAGTCTCTGGAAAGCACAAGGAGAAT
CCTGGGTTTAGCCATTGAGTCTCAGGATGCAGGAATCAAGACCATCACTATGCTGGATGAGCAAGGGGAACAACTAAATC
GCATAGAAGAAGGCATGGACCAAATAAATAAAGACATGAGAGAGGCAGAGAAGACTTTAACAGAACTCAACAAGTGTTGT
GGCCTCTGCATCTGCCCTTGTAATAGATTCTCAGTTGGTGACTGTTTCTTTGAAACCAGGACAAAGAACTTTGAGTCTGG
AAAGAACTATAAGGCAACATGGGGAGATGGTGGCGACAACTCACCTAGCAATGTAGTATCTAAGCAACCGAGCCGGATTA
CAAATGGTCAGCCTCAGCAAACTACAGGAGCAGCCAGTGGTGGATACATTAAACGTATAACTAATGATGCCAGAGAAGAT
GAGATGGAAGAGAACCTGACTCAAGTGGGCAGCATCCTAGGCAACCTAAAGAACATGGCTCTGGATATGGGCAATGAAAT
TGATGCTCAAAACCAGCAAATACAGAAGATCACAGAAAAGGCTGACACCAACAAGAATCGTATTGACATTGCCAATACAA
GAGCAAAGAAACTCATTGATAGTTAA

Library Parental gene expression (RPM)
SRP007412_brain 14 .18 RPM
SRP007412_cerebellum 16 .02 RPM
SRP007412_heart 43 .27 RPM
SRP007412_kidney 75 .59 RPM
SRP007412_liver 34 .60 RPM
SRP007412_testis 33 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000015685 ortholog_one2many 1 retrogene
retro_acar_38,
Ailuropoda melanoleuca ENSAMEG00000015774 ortholog_one2one 1 retrogene
retro_amel_206,
Bos taurus ENSBTAG00000005661 ortholog_one2one 2 retrogenes
retro_btau_1622, retro_btau_371,
Canis familiaris ENSCAFG00000011105 ortholog_one2one 2 retrogenes
retro_cfam_1073, retro_cfam_1780,
Choloepus hoffmanni ENSCHOG00000006468 ortholog_one2many 3 retrogenes
retro_chof_1, retro_chof_1652, retro_chof_1784,
Cavia porcellus ENSCPOG00000003638 ortholog_one2one 1 retrogene
retro_cpor_862,
Felis catus ENSFCAG00000013387 ortholog_one2one 1 retrogene
retro_fcat_1114,
Loxodonta africana ENSLAFG00000005462 ortholog_one2one 1 retrogene
retro_lafr_839,
Microcebus murinus ENSMICG00000000813 ortholog_one2one 2 retrogenes
retro_mmur_1188, retro_mmur_377,
Monodelphis domestica ENSMODG00000017889 ortholog_one2one 1 retrogene
retro_mdom_1772,
Mustela putorius furo ENSMPUG00000009856 ortholog_one2one 3 retrogenes
retro_mputfur_1181, retro_mputfur_692, retro_mputfur_915,
Rattus norvegicus ENSRNOG00000050552 ortholog_one2one 2 retrogenes
retro_rnor_1505, retro_rnor_2389,
Tarsius syrichta ENSTSYG00000006589 ortholog_one2one 2 retrogenes
retro_tsyr_1020, retro_tsyr_715,
Tursiops truncatus ENSTTRG00000002561 ortholog_one2one 1 retrogene
retro_ttru_658,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2570 78.77 100.00
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Download FASTA sequences of all ENSMUSG00000027287 retrocopies