Parental gene: | PSMD5, ENSMODG00000019635 |
| Aliases: | None |
| Description: | proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 [Source:HGNC Symbol;Acc:9563] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:413426034..413444080(-) |
>ENSMODG00000019635
ATGGCGGCCCGGGTTTTAGCTCTGCTTCGGGAGGTGGCTCGGCTGGAGGCGCCGCTGGAGGAACTCCGGGCCTTGCAGGC
TGCCCTGCAGTCCGTGCCGCTCAGCTCACTCCGAGAACAAGCGGCCGAGCTTCGGCTCGGGCCTCTCTTCTCGCTACTCA
ACGCAAATCACCGGGAGCAGACTACCTTGTGTGTGTCCATTCTGGAGAGATTTCTCCAAGCTATGGAACCAGTCTACGTG
GCCCGAAACCTTAGGGATGAACTGCACAGGGGACTATCTCACCCTGATGATGCTGTGGTAATCCTCACTCTGGCCCAGGT
TGGAAGAATTGTAGAAAATTCAGAGGCTGTTACCGAGATTCTCAATAGTCCTGAGTTACTGAAGGACATAATTTATTGCA
TTGGTGGAGAAAAATTATCTATAGCTAAAGCGGCTATCAAGTCACTGTCGAGAATAGCCCTAACTCAAGCTGGATTAGAG
TCTTTATTTGGAAGCAGCCTGTTAGATGATTTAAAAAATGTAATGAAAACAAGTGACATCGTACGATATAGGGTCTATGA
GCTGATTGTGGAGATTTCCTCTGTGTCACCAGAATCCTTAAAATACTGTACTGACAGCGGATTAGTAACCCAGCTCATTA
GAGAGCTGACTGGTGATGATGTTCTAGTCAGAGCCACCTGTATAGAAATGGTGACATCTCTGGCACACACTCATCATGGA
CGGCAATATCTTGCCCAAGAAGGAATAATTGATCAAATTTCTAATATCATTGTTGGGGCAGATTTAGATCCTTTCTCCAG
TTTCTATTTGCCAGGATTTGTCAAATTTTTTGGCAACCTGGCAATAGTGGATAGCCCTCAACAGATATGTGAACGATACC
CAATCTTTGTAGAAAAGGTCTTTGAAATGGCAGAAGGTCAGGATCCTACCATGATAGGAGTAGCTGTGGACACCTTAGGG
ATCCTGGGCTCAAATGTGGAAGGAAAACAGGTTTTACAGAAAACAGGAAGTCGGTTTGAACACCTGCTGAAGAGAATAGG
ACACCAAGCAAAGAATGCTTCAACAGAATTAAAAATTAGGTGTTTAGATGCGATTTCATCTCTTCTTCATTTACCACATG
ATCAACAGACTGAAGATCTTTTAAGAATGACAGAATGCTGGTTCTCTTCTTTAACTCGGGATCCACTGGAACATTTTAGA
GGGATCAGCACCCAACCTTTCTCTGAACTGCATTGTGCTGCGTTAAAAGTATTCACAGCCATTGCAAACCAACCCTGGGC
TCAGAAACTTATGCTTAACAGCCCAGGGTTTGTGGAATATGTCATGGATCGGTCTGTGGAACGTGACAAAGCTTCAAAAG
ATGCCAAATATGAACTAGTGAAAGCCCTTGCAAACTCGAAAACAATTGCAGAAATCTTTGGAAACCAATATTATTTAAGA
CTAAGAGCATACCTGAGTGAAGGCCCATACTTTGTGAAGTCTGTTTCAACTACAGCTGTGGAAGGAGCAGAATGA
ATGGCGGCCCGGGTTTTAGCTCTGCTTCGGGAGGTGGCTCGGCTGGAGGCGCCGCTGGAGGAACTCCGGGCCTTGCAGGC
TGCCCTGCAGTCCGTGCCGCTCAGCTCACTCCGAGAACAAGCGGCCGAGCTTCGGCTCGGGCCTCTCTTCTCGCTACTCA
ACGCAAATCACCGGGAGCAGACTACCTTGTGTGTGTCCATTCTGGAGAGATTTCTCCAAGCTATGGAACCAGTCTACGTG
GCCCGAAACCTTAGGGATGAACTGCACAGGGGACTATCTCACCCTGATGATGCTGTGGTAATCCTCACTCTGGCCCAGGT
TGGAAGAATTGTAGAAAATTCAGAGGCTGTTACCGAGATTCTCAATAGTCCTGAGTTACTGAAGGACATAATTTATTGCA
TTGGTGGAGAAAAATTATCTATAGCTAAAGCGGCTATCAAGTCACTGTCGAGAATAGCCCTAACTCAAGCTGGATTAGAG
TCTTTATTTGGAAGCAGCCTGTTAGATGATTTAAAAAATGTAATGAAAACAAGTGACATCGTACGATATAGGGTCTATGA
GCTGATTGTGGAGATTTCCTCTGTGTCACCAGAATCCTTAAAATACTGTACTGACAGCGGATTAGTAACCCAGCTCATTA
GAGAGCTGACTGGTGATGATGTTCTAGTCAGAGCCACCTGTATAGAAATGGTGACATCTCTGGCACACACTCATCATGGA
CGGCAATATCTTGCCCAAGAAGGAATAATTGATCAAATTTCTAATATCATTGTTGGGGCAGATTTAGATCCTTTCTCCAG
TTTCTATTTGCCAGGATTTGTCAAATTTTTTGGCAACCTGGCAATAGTGGATAGCCCTCAACAGATATGTGAACGATACC
CAATCTTTGTAGAAAAGGTCTTTGAAATGGCAGAAGGTCAGGATCCTACCATGATAGGAGTAGCTGTGGACACCTTAGGG
ATCCTGGGCTCAAATGTGGAAGGAAAACAGGTTTTACAGAAAACAGGAAGTCGGTTTGAACACCTGCTGAAGAGAATAGG
ACACCAAGCAAAGAATGCTTCAACAGAATTAAAAATTAGGTGTTTAGATGCGATTTCATCTCTTCTTCATTTACCACATG
ATCAACAGACTGAAGATCTTTTAAGAATGACAGAATGCTGGTTCTCTTCTTTAACTCGGGATCCACTGGAACATTTTAGA
GGGATCAGCACCCAACCTTTCTCTGAACTGCATTGTGCTGCGTTAAAAGTATTCACAGCCATTGCAAACCAACCCTGGGC
TCAGAAACTTATGCTTAACAGCCCAGGGTTTGTGGAATATGTCATGGATCGGTCTGTGGAACGTGACAAAGCTTCAAAAG
ATGCCAAATATGAACTAGTGAAAGCCCTTGCAAACTCGAAAACAATTGCAGAAATCTTTGGAAACCAATATTATTTAAGA
CTAAGAGCATACCTGAGTGAAGGCCCATACTTTGTGAAGTCTGTTTCAACTACAGCTGTGGAAGGAGCAGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 96 .55 RPM |
| SRP007412_cerebellum | 87 .82 RPM |
| SRP007412_heart | 25 .52 RPM |
| SRP007412_kidney | 81 .64 RPM |
| SRP007412_liver | 70 .49 RPM |
| SRP007412_testis | 40 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Vicugna pacos | ENSVPAG00000012577 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1523 | 74.47 | 64.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000019635 retrocopies