Parental gene: | Ctsb, ENSMUSG00000021939 |
| Aliases: | Ctsb, CB |
| Description: | cathepsin B [Source:MGI Symbol;Acc:MGI:88561] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 14:63122461..63145919(+) |
>ENSMUSG00000021939
ATGTGGTGGTCCTTGATCCTTCTTTCTTGCCTGCTGGCACTGACCAGTGCCCATGACAAGCCTTCCTTCCACCCGCTGTC
GGATGACCTGATTAACTATATCAACAAACAGAATACAACATGGCAGGCTGGACGCAACTTCTACAATGTTGACATAAGCT
ATCTGAAGAAGCTGTGTGGCACTGTCCTGGGTGGACCCAAACTGCCAGGAAGGGTTGCGTTCGGTGAGGACATAGATCTA
CCTGAAACCTTTGATGCACGGGAACAATGGTCCAACTGCCCGACCATTGGACAGATTAGAGACCAGGGCTCCTGCGGCTC
TTGTTGGGCATTTGGGGCAGTGGAAGCCATTTCTGACCGAACCTGCATTCACACCAATGGCCGAGTCAACGTGGAGGTGT
CTGCTGAAGACCTGCTTACTTGCTGTGGTATCCAGTGTGGGGACGGCTGTAATGGTGGCTATCCCTCTGGAGCATGGAGC
TTCTGGACAAAAAAAGGCCTGGTTTCAGGTGGAGTCTACAATTCTCATGTAGGCTGCTTACCATACACCATCCCTCCCTG
CGAGCACCATGTCAATGGCTCCCGTCCCCCATGCACTGGAGAAGGAGATACTCCCAGGTGCAACAAGAGCTGTGAAGCTG
GCTACTCCCCATCCTACAAAGAGGATAAGCACTTTGGGTACACTTCCTACAGCGTGTCTAACAGTGTGAAGGAGATCATG
GCAGAAATCTACAAAAATGGCCCAGTGGAGGGTGCCTTCACTGTGTTTTCTGACTTCTTGACTTACAAATCAGGAGTATA
CAAGCATGAAGCCGGTGATATGATGGGTGGCCACGCCATCCGCATCCTGGGCTGGGGAGTAGAGAATGGAGTTCCCTACT
GGCTGGCAGCCAACTCTTGGAACCTTGACTGGGGTGATAATGGCTTCTTTAAAATCCTCAGAGGAGAGAACCACTGTGGC
ATTGAATCAGAAATTGTGGCTGGAATCCCACGCACTGACCAGTACTGGGGAAGATTCTAA
ATGTGGTGGTCCTTGATCCTTCTTTCTTGCCTGCTGGCACTGACCAGTGCCCATGACAAGCCTTCCTTCCACCCGCTGTC
GGATGACCTGATTAACTATATCAACAAACAGAATACAACATGGCAGGCTGGACGCAACTTCTACAATGTTGACATAAGCT
ATCTGAAGAAGCTGTGTGGCACTGTCCTGGGTGGACCCAAACTGCCAGGAAGGGTTGCGTTCGGTGAGGACATAGATCTA
CCTGAAACCTTTGATGCACGGGAACAATGGTCCAACTGCCCGACCATTGGACAGATTAGAGACCAGGGCTCCTGCGGCTC
TTGTTGGGCATTTGGGGCAGTGGAAGCCATTTCTGACCGAACCTGCATTCACACCAATGGCCGAGTCAACGTGGAGGTGT
CTGCTGAAGACCTGCTTACTTGCTGTGGTATCCAGTGTGGGGACGGCTGTAATGGTGGCTATCCCTCTGGAGCATGGAGC
TTCTGGACAAAAAAAGGCCTGGTTTCAGGTGGAGTCTACAATTCTCATGTAGGCTGCTTACCATACACCATCCCTCCCTG
CGAGCACCATGTCAATGGCTCCCGTCCCCCATGCACTGGAGAAGGAGATACTCCCAGGTGCAACAAGAGCTGTGAAGCTG
GCTACTCCCCATCCTACAAAGAGGATAAGCACTTTGGGTACACTTCCTACAGCGTGTCTAACAGTGTGAAGGAGATCATG
GCAGAAATCTACAAAAATGGCCCAGTGGAGGGTGCCTTCACTGTGTTTTCTGACTTCTTGACTTACAAATCAGGAGTATA
CAAGCATGAAGCCGGTGATATGATGGGTGGCCACGCCATCCGCATCCTGGGCTGGGGAGTAGAGAATGGAGTTCCCTACT
GGCTGGCAGCCAACTCTTGGAACCTTGACTGGGGTGATAATGGCTTCTTTAAAATCCTCAGAGGAGAGAACCACTGTGGC
ATTGAATCAGAAATTGTGGCTGGAATCCCACGCACTGACCAGTACTGGGGAAGATTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 440 .16 RPM |
| SRP007412_cerebellum | 448 .28 RPM |
| SRP007412_heart | 394 .14 RPM |
| SRP007412_kidney | 603 .19 RPM |
| SRP007412_liver | 584 .21 RPM |
| SRP007412_testis | 43 .54 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000164733 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000007380 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012029 | ortholog_one2one | 6 retrogenes | |
| Mus musculus | ENSMUSG00000032359 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1921 | 78.14 | 53.39 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000021939 retrocopies